This page shows detailed deep learning-derived predictions and motifs for CTCF in C4-2B using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000498.1 |
| Cell line/tissue: | C4-2B |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR460LGH |
| Model: | BPNet |
| A [ | -9.18e-04 | -4.04e-03 | -3.28e-03 | -7.68e-04 | -7.63e-04 | 7.07e-03 | -7.72e-04 | -4.46e-04 | -2.70e-03 | 2.16e-02 | -2.54e-03 | -6.41e-03 | -9.60e-04 | -3.17e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.27e-02 | 5.59e-02 | 8.97e-05 | 1.15e-01 | 1.85e-01 | 5.98e-02 | 8.83e-02 | 1.96e-01 | 9.60e-04 | -1.89e-03 | 1.42e-02 | 5.74e-03 | -3.40e-04 | -1.76e-03 | ] |
| G [ | 3.49e-02 | 7.53e-04 | 9.23e-02 | 1.77e-03 | -4.42e-05 | -3.23e-05 | -2.05e-04 | -6.99e-05 | -1.63e-04 | 1.65e-02 | 6.45e-02 | 1.05e-03 | 1.91e-01 | 9.92e-02 | ] |
| T [ | -3.56e-03 | 9.63e-03 | -3.70e-03 | -2.09e-03 | -1.04e-03 | -5.34e-03 | 1.57e-02 | -3.65e-04 | 7.37e-02 | -5.35e-03 | -2.25e-03 | 2.27e-02 | -9.45e-04 | -2.03e-03 | ] |
| A [ | 7102 | 3860 | 5468 | 5235 | 806 | 20170 | 736 | 358 | 3674 | 22210 | 2063 | 8970 | 26 | 3789 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 16328 | 25851 | 2587 | 45516 | 54483 | 30414 | 34272 | 55501 | 4801 | 4467 | 19301 | 6688 | 14 | 3316 | ] |
| G [ | 26533 | 4029 | 38807 | 3470 | 310 | 2003 | 471 | 102 | 1591 | 20790 | 31489 | 2370 | 56281 | 43989 | ] |
| T [ | 6513 | 22735 | 9612 | 2254 | 876 | 3888 | 20996 | 514 | 46408 | 9009 | 3622 | 38446 | 154 | 5381 | ] |
