This page shows detailed deep learning-derived predictions and motifs for CTCF in endothelial cell of umbilical vein using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000499.1 |
| Cell line/tissue: | endothelial cell of umbilical vein |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DVP |
| Model: | BPNet |
| A [ | -1.53e-03 | -5.07e-03 | -5.40e-03 | -1.56e-03 | -1.25e-03 | 5.00e-03 | -9.40e-04 | -4.83e-04 | -3.67e-03 | 3.05e-02 | -3.13e-03 | -9.13e-03 | -1.07e-03 | -4.69e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.39e-02 | 7.46e-02 | 5.60e-04 | 1.65e-01 | 2.55e-01 | 9.05e-02 | 1.16e-01 | 2.77e-01 | 2.02e-03 | -3.54e-03 | 1.79e-02 | 9.05e-03 | -6.67e-04 | -2.56e-03 | ] |
| G [ | 4.54e-02 | 9.75e-04 | 1.24e-01 | 2.21e-03 | -1.36e-04 | -3.32e-04 | -2.85e-04 | -1.05e-04 | -4.54e-04 | 2.75e-02 | 9.54e-02 | 1.01e-03 | 2.75e-01 | 1.51e-01 | ] |
| T [ | -4.72e-03 | 8.48e-03 | -5.25e-03 | -3.17e-03 | -1.51e-03 | -7.19e-03 | 1.88e-02 | -5.77e-04 | 1.15e-01 | -8.47e-03 | -2.56e-03 | 3.83e-02 | -1.83e-03 | -3.38e-03 | ] |
| A [ | 5869 | 3312 | 4563 | 3962 | 786 | 14917 | 751 | 239 | 3274 | 17556 | 1527 | 7385 | 385 | 2894 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 14771 | 25026 | 2871 | 41180 | 48441 | 29413 | 32308 | 49963 | 4716 | 4667 | 17630 | 8672 | 448 | 3492 | ] |
| G [ | 24602 | 4480 | 35166 | 3637 | 642 | 2597 | 718 | 114 | 1821 | 20973 | 28402 | 2912 | 48726 | 39918 | ] |
| T [ | 5469 | 17893 | 8111 | 1931 | 842 | 3785 | 16934 | 395 | 40899 | 7515 | 3152 | 31742 | 1152 | 4408 | ] |