Detailed information of deep learning profile BP000502.1

This page shows detailed deep learning-derived predictions and motifs for NRF1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NRF1
Model ID: BP000502.1
Cell line/tissue: HepG2
Class: Uncharacterized
Family: NRF
Best Match(es): MA0506.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q5ZL67  
Source: ENCSR689JMY
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.23e-03 -1.95e-03 -9.37e-04 -4.03e-04 2.60e-02 -2.55e-04 -2.14e-06 -8.39e-06 -1.23e-06 -2.20e-05 2.35e-02 ]
C [ -5.14e-04 9.13e-02 -2.47e-04 1.04e-01 -3.79e-03 9.22e-04 -9.19e-06 1.73e-01 -1.64e-05 1.22e-01 -2.83e-03 ]
G [ 8.40e-02 -1.41e-03 1.21e-01 -7.39e-04 -2.14e-04 -2.68e-04 1.51e-01 -5.35e-06 1.54e-01 -5.36e-05 8.10e-03 ]
T [ -5.25e-04 -3.89e-04 -7.04e-04 -3.71e-04 -2.40e-03 8.22e-02 -2.40e-06 -4.40e-06 -1.08e-04 1.25e-03 -2.58e-03 ]

Frequency matrix

A [ 1587 1654 1020 636 4382 684 184 3 4 107 5474 ]
C [ 1444 9547 595 9884 5371 1400 235 13252 8 11805 2657 ]
G [ 9730 1554 11204 1922 2194 2007 12769 5 13236 406 3756 ]
T [ 513 519 455 833 1327 9183 86 14 26 956 1387 ]

11 profiles found for the same TF (NRF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000371.1 NRF1 ENCSR000EHH K562 Homo sapiens
BP000443.1 NRF1 ENCSR135ANT MCF-7 Homo sapiens
BP000505.1 NRF1 ENCSR998AJK K562 Homo sapiens
BP000575.1 NRF1 ENCSR000EDJ HeLa-S3 Homo sapiens
BP000586.1 NRF1 ENCSR837EYC K562 Homo sapiens
BP000819.1 NRF1 ENCSR000DZO GM12878 Homo sapiens
BP000972.1 NRF1 ENCSR494TDU K562 Homo sapiens
BP001109.1 NRF1 ENCSR000EEH HepG2 Homo sapiens
BP001112.1 NRF1 ENCSR000ECC H1 Homo sapiens
BP001198.1 NRF1 ENCSR000EHZ SK-N-SH Homo sapiens
Showing 10 profiles of page 1 from 2 pages