This page shows detailed deep learning-derived predictions and motifs for CTCF in GM10248 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000503.1 |
| Cell line/tissue: | GM10248 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DKP |
| Model: | BPNet |
| A [ | -1.87e-03 | -1.16e-03 | 2.48e-02 | -1.80e-03 | -5.02e-03 | 7.95e-02 | -5.09e-04 | 2.18e-02 | -4.30e-03 | -8.65e-04 | -1.76e-03 | -4.12e-03 | 8.89e-03 | -3.71e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.64e-02 | 1.81e-01 | -7.21e-04 | 5.53e-02 | 1.17e-02 | -3.96e-04 | -1.16e-04 | -2.24e-04 | -5.06e-04 | -9.13e-05 | 3.37e-04 | 1.01e-01 | -3.01e-04 | 3.92e-02 | ] |
| G [ | -2.36e-03 | -5.81e-04 | 7.09e-03 | 1.26e-02 | -2.22e-03 | 6.16e-04 | 1.89e-01 | 8.03e-02 | 5.96e-02 | 1.74e-01 | 1.17e-01 | -6.76e-04 | 5.99e-02 | 1.03e-02 | ] |
| T [ | -2.97e-03 | -8.62e-04 | -4.99e-03 | -2.40e-03 | 2.24e-02 | -2.48e-03 | -4.04e-04 | -5.29e-04 | 9.01e-03 | -5.60e-04 | -2.60e-04 | -3.86e-03 | -3.45e-03 | -1.04e-03 | ] |
| A [ | 4357 | 782 | 27392 | 2968 | 6769 | 34337 | 466 | 15498 | 2667 | 219 | 862 | 5843 | 16343 | 4042 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 31875 | 41278 | 2500 | 22888 | 16769 | 1532 | 122 | 313 | 1731 | 44 | 1199 | 32254 | 1872 | 22245 | ] |
| G [ | 3309 | 383 | 6462 | 15279 | 4291 | 3891 | 41822 | 26555 | 23243 | 42309 | 37443 | 1196 | 22554 | 12446 | ] |
| T [ | 3150 | 249 | 6337 | 1557 | 14862 | 2932 | 282 | 326 | 15051 | 120 | 3187 | 3398 | 1923 | 3959 | ] |
