Detailed information of deep learning profile BP000507.1

This page shows detailed deep learning-derived predictions and motifs for EGR1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: EGR1
Model ID: BP000507.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0162.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P18146  
Source: ENCSR211LTF
Model: BPNet

Contribution weight matrix (CWM)

A [ -2.88e-04 -1.17e-03 -8.85e-06 -6.14e-05 3.70e-04 9.78e-06 -4.30e-08 -9.32e-04 -3.43e-04 -4.46e-04 ]
C [ -3.67e-04 1.57e-02 5.27e-06 2.84e-05 1.96e-06 1.19e-05 -2.96e-07 1.72e-02 -1.31e-04 -2.14e-04 ]
G [ 2.06e-02 4.01e-04 6.13e-02 7.34e-03 4.25e-02 5.05e-02 6.45e-02 4.97e-05 4.01e-02 1.46e-02 ]
T [ -3.22e-04 -4.82e-04 -2.11e-06 1.53e-02 -1.88e-05 3.38e-06 2.61e-07 1.34e-03 -2.96e-04 1.21e-03 ]

Frequency matrix

A [ 19290 23837 898 7019 12435 1601 153 28906 5966 10853 ]
C [ 17996 39035 280 9408 2203 2395 241 48593 3401 9530 ]
G [ 71927 26048 117698 55021 102912 109511 118487 10527 105284 76704 ]
T [ 9899 30192 236 47664 1562 5605 231 31087 4461 22025 ]

10 profiles found for the same TF (EGR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000330.1 EGR1 ENCSR024CNP K562 Homo sapiens
BP000348.1 EGR1 ENCSR000BMQ GM12878 Homo sapiens
BP000440.1 EGR1 ENCSR000BRZ HCT116 Homo sapiens
BP000470.1 EGR1 ENCSR026GSW HepG2 Homo sapiens
BP000628.1 EGR1 ENCSR736BUG liver Homo sapiens
BP000635.1 EGR1 ENCSR000BUX MCF-7 Homo sapiens
BP000770.1 EGR1 ENCSR000BNE K562 Homo sapiens
BP000794.1 EGR1 ENCSR000BJA H1 Homo sapiens
BP001030.1 EGR1 ENCSR290ZOS liver Homo sapiens
BP001164.1 EGR1 ENCSR000BSQ Ishikawa Homo sapiens
Showing 10 profiles of page 1 from 1 pages
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