Detailed information of deep learning profile BP000507.1

This page shows detailed deep learning-derived predictions and motifs for EGR1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: EGR1
Model ID: BP000507.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0162.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P18146  
Source: ENCSR211LTF
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.21e-03 -2.96e-04 1.34e-03 2.61e-07 3.38e-06 -1.88e-05 1.53e-02 -2.11e-06 -4.82e-04 -3.22e-04 ]
C [ 1.46e-02 4.01e-02 4.97e-05 6.45e-02 5.05e-02 4.25e-02 7.34e-03 6.13e-02 4.01e-04 2.06e-02 ]
G [ -2.14e-04 -1.31e-04 1.72e-02 -2.96e-07 1.19e-05 1.96e-06 2.84e-05 5.27e-06 1.57e-02 -3.67e-04 ]
T [ -4.46e-04 -3.43e-04 -9.32e-04 -4.30e-08 9.78e-06 3.70e-04 -6.14e-05 -8.85e-06 -1.17e-03 -2.88e-04 ]

Frequency matrix

A [ 22025 4461 31087 231 5605 1562 47664 236 30192 9899 ]
C [ 76704 105284 10527 118487 109511 102912 55021 117698 26048 71927 ]
G [ 9530 3401 48593 241 2395 2203 9408 280 39035 17996 ]
T [ 10853 5966 28906 153 1601 12435 7019 898 23837 19290 ]

10 profiles found for the same TF (EGR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000330.1 EGR1 ENCSR024CNP K562 Homo sapiens
BP000348.1 EGR1 ENCSR000BMQ GM12878 Homo sapiens
BP000440.1 EGR1 ENCSR000BRZ HCT116 Homo sapiens
BP000470.1 EGR1 ENCSR026GSW HepG2 Homo sapiens
BP000628.1 EGR1 ENCSR736BUG liver Homo sapiens
BP000635.1 EGR1 ENCSR000BUX MCF-7 Homo sapiens
BP000770.1 EGR1 ENCSR000BNE K562 Homo sapiens
BP000794.1 EGR1 ENCSR000BJA H1 Homo sapiens
BP001030.1 EGR1 ENCSR290ZOS liver Homo sapiens
BP001164.1 EGR1 ENCSR000BSQ Ishikawa Homo sapiens
Showing 10 profiles of page 1 from 1 pages
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