This page shows detailed deep learning-derived predictions and motifs for SRF in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | SRF |
| Model ID: | BP000510.1 |
| Cell line/tissue: | HepG2 |
| Class: | MADS box factors |
| Family: | Responders to external signals (SRF/RLM1) |
| Best Match(es): | MA0083.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P11831 |
| Source: | ENCSR000BLV |
| Model: | BPNet |
| A [ | -2.88e-04 | -2.76e-05 | 2.02e-02 | 1.37e-02 | 5.70e-02 | 5.48e-03 | 4.22e-02 | 7.14e-03 | 2.75e-04 | -1.43e-04 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.64e-02 | 7.91e-02 | -2.58e-04 | -8.49e-04 | -9.14e-05 | -1.26e-03 | -2.64e-04 | -5.74e-05 | 2.17e-06 | -4.75e-05 | ] |
| G [ | -5.87e-05 | 8.80e-07 | 6.52e-05 | -7.30e-04 | -4.07e-04 | -6.90e-04 | -2.97e-04 | -6.00e-04 | 8.93e-02 | 8.07e-02 | ] |
| T [ | -1.66e-04 | 9.85e-04 | 1.50e-03 | 1.69e-02 | 2.44e-04 | 3.30e-02 | 8.30e-04 | 7.52e-03 | 1.30e-05 | -1.17e-04 | ] |
