This page shows detailed deep learning-derived predictions and motifs for CTCF in right lobe of liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000511.1 |
| Cell line/tissue: | right lobe of liver |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000VGD |
| Model: | BPNet |
| A [ | -1.55e-03 | -1.26e-03 | 2.39e-02 | -2.06e-03 | -5.28e-03 | 7.56e-02 | -3.67e-04 | 1.63e-02 | -4.37e-03 | -8.81e-04 | -1.82e-03 | -3.33e-03 | 9.45e-03 | -3.05e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.70e-02 | 1.70e-01 | -2.57e-04 | 5.62e-02 | 1.71e-02 | -3.56e-04 | -9.80e-05 | -1.93e-04 | -3.79e-04 | -1.09e-04 | 6.70e-04 | 8.85e-02 | -3.42e-04 | 3.21e-02 | ] |
| G [ | -2.06e-03 | -5.06e-04 | 7.58e-03 | 1.05e-02 | -2.68e-03 | 7.06e-04 | 1.73e-01 | 7.36e-02 | 5.34e-02 | 1.61e-01 | 1.06e-01 | -3.99e-04 | 5.47e-02 | 1.02e-02 | ] |
| T [ | -3.22e-03 | -8.89e-04 | -5.88e-03 | -2.10e-03 | 2.00e-02 | -2.22e-03 | -2.91e-04 | -5.73e-04 | 6.88e-03 | -5.47e-04 | -3.91e-04 | -3.02e-03 | -3.56e-03 | -1.19e-03 | ] |
| A [ | 4773 | 1252 | 31180 | 3117 | 7281 | 39230 | 354 | 18038 | 2949 | 728 | 1339 | 7041 | 19208 | 4790 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 36406 | 45790 | 2454 | 26430 | 18976 | 1560 | 112 | 461 | 1983 | 247 | 2228 | 34842 | 2694 | 23586 | ] |
| G [ | 3380 | 422 | 7526 | 16705 | 4137 | 4002 | 47178 | 28790 | 26176 | 46295 | 40337 | 1811 | 23400 | 14513 | ] |
| T [ | 3269 | 364 | 6668 | 1576 | 17434 | 3036 | 184 | 539 | 16719 | 558 | 3924 | 4133 | 2525 | 4939 | ] |