Detailed information of deep learning profile BP000512.1

This page shows detailed deep learning-derived predictions and motifs for USF1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF1
Model ID: BP000512.1
Cell line/tissue: A549
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0093.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P22415  
Source: ENCSR000BPV
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.40e-03 -1.91e-04 2.24e-06 8.59e-02 -8.81e-07 3.31e-03 -1.49e-04 -1.76e-06 9.28e-03 -1.41e-03 ]
C [ -4.75e-04 1.56e-04 9.93e-02 2.01e-05 7.61e-02 7.44e-05 1.61e-04 1.91e-05 -1.02e-03 1.32e-02 ]
G [ 3.21e-02 -2.58e-04 1.32e-05 1.34e-05 1.40e-04 6.03e-02 -1.06e-04 9.78e-02 8.28e-04 -5.80e-04 ]
T [ -2.91e-04 4.12e-02 8.61e-06 -1.21e-05 6.86e-04 -1.00e-05 7.14e-02 7.68e-06 -1.34e-03 2.57e-03 ]

Frequency matrix

A [ 3578 1108 58 16546 36 3880 366 20 6623 1538 ]
C [ 2220 4089 16776 118 13815 1000 549 39 2948 8031 ]
G [ 10268 2059 51 153 843 11889 362 16694 5538 3176 ]
T [ 835 9646 16 84 2208 132 15624 148 1792 4156 ]

13 profiles found for the same TF (USF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001031.1 USF1 ENCSR787CHF K562 Homo sapiens
BP001122.1 USF1 ENCSR248QBT WTC11 Homo sapiens
BP001205.1 USF1 ENCSR000BKT K562 Homo sapiens
Showing 3 profiles of page 2 from 2 pages