Detailed information of deep learning profile BP000513.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000513.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR070VXO
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.00e-02 5.19e-05 7.95e-03 6.98e-02 0.00e+00 3.35e-02 -7.61e-04 2.91e-03 3.31e-03 -2.21e-03 -1.07e-05 -7.84e-04 1.68e-03 -1.83e-04 -2.33e-03 ]
C [ -1.29e-04 -4.20e-06 -1.33e-03 3.97e-06 1.03e-01 -1.06e-04 1.62e-03 -5.18e-04 4.49e-03 3.11e-03 -1.88e-05 -6.61e-04 -1.15e-04 4.21e-02 5.33e-03 ]
G [ 7.68e-03 7.07e-02 -5.71e-04 3.33e-06 0.00e+00 2.05e-03 2.14e-03 -6.11e-04 1.80e-03 -1.82e-03 8.90e-02 -6.03e-04 -1.82e-03 -3.09e-04 -8.76e-05 ]
T [ -1.29e-03 2.48e-05 2.59e-03 -8.91e-06 0.00e+00 -4.63e-04 6.36e-03 3.36e-03 -1.01e-03 1.97e-02 9.53e-06 5.22e-02 3.79e-03 -6.66e-04 7.84e-03 ]

Frequency matrix

A [ 24817 2165 21965 49738 0 39627 9115 16049 14098 13387 1 7727 12029 10863 10671 ]
C [ 1066 71 7081 165 51883 997 12859 10406 15428 3556 5 5434 12859 26275 16301 ]
G [ 16646 48216 10805 348 0 2975 14467 10406 13326 4594 51875 4243 9970 2597 5025 ]
T [ 9355 1432 12034 1633 1 8285 15443 15023 9032 30346 3 34480 17027 12149 19886 ]

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000789.1 NR3C1 ENCSR000BHE A549 Homo sapiens
BP000837.1 NR3C1 ENCSR287FWE A549 Homo sapiens
BP000919.1 NR3C1 ENCSR908AOO A549 Homo sapiens
BP000983.1 NR3C1 ENCSR000BJC Ishikawa Homo sapiens
BP001035.1 NR3C1 ENCSR773NQB A549 Homo sapiens
BP001127.1 NR3C1 ENCSR660RYY A549 Homo sapiens
BP001151.1 NR3C1 ENCSR919OXR A549 Homo sapiens
BP001200.1 NR3C1 ENCSR458VTP A549 Homo sapiens
Showing 8 profiles of page 2 from 2 pages