Detailed information of deep learning profile BP000513.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000513.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR070VXO
Model: BPNet

Contribution weight matrix (CWM)

A [ 7.84e-03 -6.66e-04 3.79e-03 5.22e-02 9.53e-06 1.97e-02 -1.01e-03 3.36e-03 6.36e-03 -4.63e-04 0.00e+00 -8.91e-06 2.59e-03 2.48e-05 -1.29e-03 ]
C [ -8.76e-05 -3.09e-04 -1.82e-03 -6.03e-04 8.90e-02 -1.82e-03 1.80e-03 -6.11e-04 2.14e-03 2.05e-03 0.00e+00 3.33e-06 -5.71e-04 7.07e-02 7.68e-03 ]
G [ 5.33e-03 4.21e-02 -1.15e-04 -6.61e-04 -1.88e-05 3.11e-03 4.49e-03 -5.18e-04 1.62e-03 -1.06e-04 1.03e-01 3.97e-06 -1.33e-03 -4.20e-06 -1.29e-04 ]
T [ -2.33e-03 -1.83e-04 1.68e-03 -7.84e-04 -1.07e-05 -2.21e-03 3.31e-03 2.91e-03 -7.61e-04 3.35e-02 0.00e+00 6.98e-02 7.95e-03 5.19e-05 1.00e-02 ]

Frequency matrix

A [ 19886 12149 17027 34480 3 30346 9032 15023 15443 8285 1 1633 12034 1432 9355 ]
C [ 5025 2597 9970 4243 51875 4594 13326 10406 14467 2975 0 348 10805 48216 16646 ]
G [ 16301 26275 12859 5434 5 3556 15428 10406 12859 997 51883 165 7081 71 1066 ]
T [ 10671 10863 12029 7727 1 13387 14098 16049 9115 39627 0 49738 21965 2165 24817 ]

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000215.1 NR3C1 ENCSR952GOL A549 Homo sapiens
BP000278.1 NR3C1 ENCSR471EKW A549 Homo sapiens
BP000289.1 NR3C1 ENCSR000BHG A549 Homo sapiens
BP000310.1 NR3C1 ENCSR255CTA A549 Homo sapiens
BP000332.1 NR3C1 ENCSR720DXT A549 Homo sapiens
BP000345.1 NR3C1 ENCSR385RUW A549 Homo sapiens
BP000581.1 NR3C1 ENCSR691GRA A549 Homo sapiens
BP000659.1 NR3C1 ENCSR424JOE A549 Homo sapiens
BP000734.1 NR3C1 ENCSR686PFM A549 Homo sapiens
BP000782.1 NR3C1 ENCSR857QEA A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages