Detailed information of deep learning profile BP000515.1

This page shows detailed deep learning-derived predictions and motifs for MYC in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000515.1
Cell line/tissue: MCF-7
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0147.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P01108  
Source: ENCSR000DMQ
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.49e-04 -2.62e-05 3.73e-02 0.00e+00 5.80e-06 -6.59e-04 -8.17e-06 -8.37e-04 ]
C [ 3.10e-03 5.32e-02 0.00e+00 5.57e-02 0.00e+00 5.13e-03 5.84e-05 1.59e-03 ]
G [ 8.27e-03 6.11e-06 5.28e-04 6.11e-06 5.67e-02 1.90e-06 4.70e-02 1.11e-02 ]
T [ -1.08e-03 -1.07e-06 -1.47e-04 8.21e-05 -1.98e-06 2.63e-02 -7.57e-05 -3.07e-04 ]

Frequency matrix

A [ 10086 1176 44666 40 892 6143 1816 7546 ]
C [ 18253 56094 1478 55857 667 25448 6775 18607 ]
G [ 23462 347 8865 523 56215 1815 41075 22927 ]
T [ 6024 208 2816 1405 51 24418 8159 8746 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000821.1 MYC ENCSR000EZU K562 Homo sapiens
BP000861.1 MYC ENCSR000EGJ K562 Homo sapiens
BP000959.1 MYC ENCSR000DMM MCF-7 Homo sapiens
BP000963.1 MYC ENCSR000FAZ K562 Homo sapiens
BP001062.1 MYC ENCSR000DOS MCF 10A Homo sapiens
BP001117.1 MYC ENCSR000FAG K562 Homo sapiens
BP001176.1 MYC ENCSR000EZD HeLa-S3 Homo sapiens
BP001187.1 MYC ENCSR000EBY H1 Homo sapiens
Showing 8 profiles of page 2 from 2 pages