Detailed information of deep learning profile BP000517.1

This page shows detailed deep learning-derived predictions and motifs for MYC in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000517.1
Cell line/tissue: MCF-7
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0147.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P01108  
Source: ENCSR000DMJ
Model: BPNet

Contribution weight matrix (CWM)

A [ -2.45e-04 0.00e+00 2.02e-02 0.00e+00 0.00e+00 0.00e+00 0.00e+00 -1.08e-04 ]
C [ 8.91e-03 2.66e-02 0.00e+00 4.02e-02 0.00e+00 5.69e-04 0.00e+00 3.37e-03 ]
G [ 1.25e-03 0.00e+00 7.10e-04 0.00e+00 3.99e-02 0.00e+00 2.75e-02 6.06e-03 ]
T [ -1.41e-04 0.00e+00 0.00e+00 0.00e+00 0.00e+00 2.14e-02 0.00e+00 -3.58e-04 ]

Frequency matrix

A [ 3294 1252 10899 0 286 1407 64 2817 ]
C [ 9469 20011 3973 24314 6 6193 388 9688 ]
G [ 8526 2683 7618 5 24144 4355 23756 7964 ]
T [ 3147 490 1946 117 0 12481 228 3967 ]

18 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000821.1 MYC ENCSR000EZU K562 Homo sapiens
BP000861.1 MYC ENCSR000EGJ K562 Homo sapiens
BP000959.1 MYC ENCSR000DMM MCF-7 Homo sapiens
BP000963.1 MYC ENCSR000FAZ K562 Homo sapiens
BP001062.1 MYC ENCSR000DOS MCF 10A Homo sapiens
BP001117.1 MYC ENCSR000FAG K562 Homo sapiens
BP001176.1 MYC ENCSR000EZD HeLa-S3 Homo sapiens
BP001187.1 MYC ENCSR000EBY H1 Homo sapiens
Showing 8 profiles of page 2 from 2 pages