Detailed information of deep learning profile BP000517.1

This page shows detailed deep learning-derived predictions and motifs for MYC in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000517.1
Cell line/tissue: MCF-7
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0147.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P01108  
Source: ENCSR000DMJ
Model: BPNet

Contribution weight matrix (CWM)

A [ -3.58e-04 0.00e+00 2.14e-02 0.00e+00 0.00e+00 0.00e+00 0.00e+00 -1.41e-04 ]
C [ 6.06e-03 2.75e-02 0.00e+00 3.99e-02 0.00e+00 7.10e-04 0.00e+00 1.25e-03 ]
G [ 3.37e-03 0.00e+00 5.69e-04 0.00e+00 4.02e-02 0.00e+00 2.66e-02 8.91e-03 ]
T [ -1.08e-04 0.00e+00 0.00e+00 0.00e+00 0.00e+00 2.02e-02 0.00e+00 -2.45e-04 ]

Frequency matrix

A [ 3967 228 12481 0 117 1946 490 3147 ]
C [ 7964 23756 4355 24144 5 7618 2683 8526 ]
G [ 9688 388 6193 6 24314 3973 20011 9469 ]
T [ 2817 64 1407 286 0 10899 1252 3294 ]

18 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000197.1 MYC ENCSR000DYC A549 Homo sapiens
BP000315.1 MYC ENCSR000EZV K562 Homo sapiens
BP000398.1 MYC ENCSR000DMP MCF-7 Homo sapiens
BP000430.1 MYC ENCSR784BVD HepG2 Homo sapiens
BP000504.1 MYC ENCSR744JJU K562 Homo sapiens
BP000506.1 MYC ENCSR000EHR NB4 Homo sapiens
BP000515.1 MYC ENCSR000DMQ MCF-7 Homo sapiens
BP000662.1 MYC ENCSR000DLZ K562 Homo sapiens
BP000726.1 MYC ENCSR000EGS K562 Homo sapiens
BP000752.1 MYC ENCSR000DOM MCF 10A Homo sapiens
Showing 10 profiles of page 1 from 2 pages