Detailed information of deep learning profile BP000522.1

This page shows detailed deep learning-derived predictions and motifs for CUX1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CUX1
Model ID: BP000522.1
Cell line/tissue: MCF-7
Class: Homeo domain factors
Family: HD-CUT
Best Match(es): MA0754.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P31271  
Source: ENCSR017CEO
Model: BPNet

Contribution weight matrix (CWM)

A [ -2.11e-04 4.62e-02 3.83e-06 -2.37e-04 2.89e-05 4.62e-02 -2.10e-04 -3.47e-04 6.31e-03 ]
C [ -8.03e-04 -8.48e-06 2.41e-05 6.65e-03 4.86e-06 -7.17e-06 2.47e-05 5.66e-03 -5.65e-04 ]
G [ 6.70e-04 7.38e-06 -8.60e-07 -5.07e-05 4.84e-02 8.07e-05 -5.34e-05 -3.92e-04 2.30e-04 ]
T [ 7.39e-03 9.33e-07 4.22e-02 1.48e-02 6.31e-06 -4.01e-06 3.63e-02 3.10e-03 -2.00e-03 ]

Frequency matrix

A [ 8102 31989 981 3770 922 32758 1362 6770 15114 ]
C [ 5727 370 2456 4968 128 791 838 10136 4472 ]
G [ 7662 997 525 1292 33760 1056 213 3077 6140 ]
T [ 13808 1943 31337 25269 489 694 32886 15316 9573 ]

Alternative motif patterns (AMPs)

3 profiles found for the same TF (CUX1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000433.1 CUX1 ENCSR000DYR GM12878 Homo sapiens
BP000446.1 CUX1 ENCSR000EFO K562 Homo sapiens
BP000567.1 CUX1 ENCSR178NTX K562 Homo sapiens
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