This page shows detailed deep learning-derived predictions and motifs for CTCF in fibroblast of lung using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000523.1 |
| Cell line/tissue: | fibroblast of lung |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000ANO |
| Model: | BPNet |
| A [ | -1.15e-03 | -3.86e-03 | -3.56e-03 | -1.10e-03 | -8.71e-04 | 2.83e-03 | -7.77e-04 | -3.28e-04 | -2.90e-03 | 2.10e-02 | -2.37e-03 | -6.13e-03 | -8.15e-04 | -3.22e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.04e-02 | 5.40e-02 | 2.47e-04 | 1.14e-01 | 1.81e-01 | 6.52e-02 | 8.19e-02 | 2.03e-01 | 1.35e-03 | -2.60e-03 | 1.49e-02 | 6.53e-03 | -4.24e-04 | -2.16e-03 | ] |
| G [ | 3.43e-02 | 4.77e-04 | 8.69e-02 | 9.52e-04 | -8.40e-05 | -3.55e-04 | -1.22e-04 | -9.72e-05 | -3.49e-04 | 1.76e-02 | 6.92e-02 | -1.06e-04 | 2.04e-01 | 1.08e-01 | ] |
| T [ | -3.61e-03 | 6.97e-03 | -2.54e-03 | -2.02e-03 | -1.06e-03 | -5.32e-03 | 1.76e-02 | -5.90e-04 | 8.50e-02 | -5.99e-03 | -2.19e-03 | 2.92e-02 | -1.13e-03 | -2.30e-03 | ] |
| A [ | 4980 | 2795 | 4013 | 3652 | 340 | 14208 | 618 | 245 | 2876 | 16034 | 1481 | 6942 | 27 | 2773 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 13543 | 22230 | 2157 | 37495 | 44641 | 25880 | 27842 | 44779 | 4141 | 4089 | 16108 | 6225 | 30 | 3005 | ] |
| G [ | 22067 | 3360 | 31836 | 2808 | 141 | 1999 | 567 | 118 | 1624 | 18381 | 25274 | 2457 | 45406 | 35591 | ] |
| T [ | 4985 | 17190 | 7570 | 1620 | 453 | 3488 | 16547 | 433 | 36934 | 7071 | 2713 | 29950 | 112 | 4207 | ] |
