Detailed information of deep learning profile BP000526.1

This page shows detailed deep learning-derived predictions and motifs for HNF4G in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: HNF4G
Model ID: BP000526.1
Cell line/tissue: liver
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Best Match(es): MA0484.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q14541  
Source: ENCSR297GII
Model: BPNet

Contribution weight matrix (CWM)

A [ -2.25e-03 3.88e-04 6.88e-03 3.33e-02 -1.74e-05 -1.10e-04 -4.30e-04 -2.75e-04 -1.30e-04 1.97e-03 6.24e-03 -6.54e-04 -1.75e-03 ]
C [ 1.30e-03 -3.86e-04 -6.81e-04 7.22e-03 6.79e-02 5.69e-04 -6.09e-04 1.97e-04 -2.90e-04 -4.57e-04 6.91e-03 3.76e-02 8.00e-03 ]
G [ -9.88e-04 4.31e-02 1.44e-02 -1.90e-04 -1.24e-05 -2.87e-05 -4.11e-04 -2.21e-04 4.69e-02 7.17e-03 -9.31e-04 -7.73e-04 -3.41e-04 ]
T [ 1.53e-02 -2.82e-04 -1.05e-03 -5.06e-04 -1.12e-05 3.89e-02 3.72e-02 4.18e-02 -3.87e-05 -1.88e-03 -9.10e-04 -9.99e-04 5.27e-03 ]

Frequency matrix

A [ 3727 3310 9356 18343 0 547 796 531 2356 7680 8592 3824 4505 ]
C [ 3126 322 3328 7693 27281 2676 4172 924 815 6448 10610 17893 9750 ]
G [ 2455 22830 12666 217 0 104 791 782 23444 8446 2584 1325 2116 ]
T [ 17973 819 1931 1027 0 23954 21522 25043 666 4706 5495 4240 10909 ]

2 profiles found for the same TF (HNF4G) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000415.1 HNF4G ENCSR000BNJ HepG2 Homo sapiens
BP001136.1 HNF4G ENCSR793EHQ HepG2 Homo sapiens
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