Detailed information of deep learning profile BP000526.1

This page shows detailed deep learning-derived predictions and motifs for HNF4G in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: HNF4G
Model ID: BP000526.1
Cell line/tissue: liver
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Best Match(es): MA0484.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q14541  
Source: ENCSR297GII
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.27e-03 -9.99e-04 -9.10e-04 -1.88e-03 -3.87e-05 4.18e-02 3.72e-02 3.89e-02 -1.12e-05 -5.06e-04 -1.05e-03 -2.82e-04 1.53e-02 ]
C [ -3.41e-04 -7.73e-04 -9.31e-04 7.17e-03 4.69e-02 -2.21e-04 -4.11e-04 -2.87e-05 -1.24e-05 -1.90e-04 1.44e-02 4.31e-02 -9.88e-04 ]
G [ 8.00e-03 3.76e-02 6.91e-03 -4.57e-04 -2.90e-04 1.97e-04 -6.09e-04 5.69e-04 6.79e-02 7.22e-03 -6.81e-04 -3.86e-04 1.30e-03 ]
T [ -1.75e-03 -6.54e-04 6.24e-03 1.97e-03 -1.30e-04 -2.75e-04 -4.30e-04 -1.10e-04 -1.74e-05 3.33e-02 6.88e-03 3.88e-04 -2.25e-03 ]

Frequency matrix

A [ 10909 4240 5495 4706 666 25043 21522 23954 0 1027 1931 819 17973 ]
C [ 2116 1325 2584 8446 23444 782 791 104 0 217 12666 22830 2455 ]
G [ 9750 17893 10610 6448 815 924 4172 2676 27281 7693 3328 322 3126 ]
T [ 4505 3824 8592 7680 2356 531 796 547 0 18343 9356 3310 3727 ]

2 profiles found for the same TF (HNF4G) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000415.1 HNF4G ENCSR000BNJ HepG2 Homo sapiens
BP001136.1 HNF4G ENCSR793EHQ HepG2 Homo sapiens
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