This page shows detailed deep learning-derived predictions and motifs for CTCF in NB4 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000527.1 |
| Cell line/tissue: | NB4 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DWN |
| Model: | BPNet |
| A [ | -1.79e-03 | -1.21e-03 | 2.23e-02 | -1.05e-03 | -4.46e-03 | 6.57e-02 | -3.73e-04 | 1.17e-02 | -4.46e-03 | -8.06e-04 | -1.73e-03 | -3.81e-03 | 5.19e-03 | -3.06e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.62e-02 | 1.59e-01 | 5.22e-04 | 5.04e-02 | 1.29e-02 | -4.56e-04 | -1.09e-04 | -1.83e-04 | -2.73e-04 | -4.97e-05 | 1.54e-03 | 8.64e-02 | 5.67e-04 | 3.33e-02 | ] |
| G [ | -1.51e-03 | -4.93e-04 | 5.07e-03 | 1.09e-02 | -2.16e-03 | 1.26e-03 | 1.69e-01 | 7.40e-02 | 5.57e-02 | 1.60e-01 | 1.05e-01 | 1.52e-04 | 5.46e-02 | 9.56e-03 | ] |
| T [ | -2.85e-03 | -8.80e-04 | -5.63e-03 | -1.87e-03 | 1.99e-02 | -2.19e-03 | -3.19e-04 | -6.19e-04 | 2.58e-03 | -7.17e-04 | -1.06e-03 | -3.40e-03 | -3.56e-03 | -1.09e-03 | ] |
| A [ | 4195 | 699 | 30030 | 2953 | 6667 | 37481 | 5 | 16543 | 2948 | 467 | 1339 | 6632 | 17424 | 4442 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 35000 | 43660 | 2240 | 24146 | 17856 | 978 | 3 | 243 | 1283 | 103 | 1797 | 32532 | 2819 | 22627 | ] |
| G [ | 2669 | 168 | 5250 | 16145 | 3675 | 3459 | 44708 | 27474 | 25612 | 43836 | 38062 | 1636 | 21835 | 12952 | ] |
| T [ | 2858 | 195 | 7202 | 1478 | 16524 | 2804 | 6 | 462 | 14880 | 316 | 3524 | 3922 | 2643 | 4701 | ] |