This page shows detailed deep learning-derived predictions and motifs for CTCF in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000529.1 |
| Cell line/tissue: | MCF-7 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DMR |
| Model: | BPNet |
| A [ | -1.34e-03 | -3.61e-03 | -2.85e-03 | -8.77e-04 | -9.60e-04 | 5.38e-03 | -7.70e-04 | -5.34e-04 | -2.11e-03 | 1.35e-02 | -2.13e-03 | -5.48e-03 | -1.24e-03 | -2.85e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.49e-03 | 4.57e-02 | 1.01e-05 | 9.60e-02 | 1.49e-01 | 4.84e-02 | 7.18e-02 | 1.57e-01 | 1.89e-03 | -8.64e-04 | 1.27e-02 | 5.10e-03 | -4.28e-04 | -1.22e-03 | ] |
| G [ | 3.03e-02 | 8.92e-04 | 7.51e-02 | 1.69e-03 | 6.79e-05 | -6.62e-05 | -1.63e-04 | -4.02e-05 | -2.23e-04 | 1.28e-02 | 4.41e-02 | 1.25e-03 | 1.42e-01 | 7.29e-02 | ] |
| T [ | -2.81e-03 | 5.84e-03 | -3.74e-03 | -2.05e-03 | -1.16e-03 | -5.73e-03 | 9.77e-03 | -4.70e-04 | 5.19e-02 | -4.09e-03 | -1.68e-03 | 1.79e-02 | -1.75e-03 | -2.49e-03 | ] |
| A [ | 11328 | 6558 | 8345 | 7740 | 854 | 33121 | 1237 | 793 | 9069 | 29308 | 4300 | 18102 | 18 | 7179 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 25992 | 39584 | 3589 | 72749 | 85567 | 41958 | 56789 | 85512 | 10347 | 10055 | 34830 | 8730 | 13 | 7265 | ] |
| G [ | 40304 | 6574 | 59954 | 4271 | 197 | 3613 | 787 | 205 | 2777 | 32303 | 41248 | 5472 | 87516 | 63595 | ] |
| T [ | 10012 | 34920 | 15748 | 2875 | 1018 | 8944 | 28823 | 1125 | 65443 | 15970 | 7258 | 55332 | 89 | 9597 | ] |
