This page shows detailed deep learning-derived predictions and motifs for CTCF in stomach using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000534.1 |
| Cell line/tissue: | stomach |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR173AIR |
| Model: | BPNet |
| A [ | -8.19e-04 | -2.27e-03 | -2.15e-03 | -1.42e-04 | -3.55e-04 | 5.76e-03 | -3.24e-04 | -1.86e-04 | -1.55e-03 | 1.31e-02 | -1.27e-03 | -3.62e-03 | -4.03e-04 | -2.22e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.52e-03 | 3.92e-02 | -5.80e-04 | 7.87e-02 | 1.18e-01 | 3.47e-02 | 5.10e-02 | 1.26e-01 | -8.45e-05 | -1.65e-03 | 9.00e-03 | 5.59e-03 | -1.66e-04 | -1.11e-03 | ] |
| G [ | 2.22e-02 | -7.02e-04 | 6.78e-02 | -4.91e-07 | -9.73e-06 | 7.42e-05 | 1.02e-05 | -9.48e-06 | -1.46e-04 | 1.14e-02 | 4.78e-02 | -7.10e-04 | 1.31e-01 | 6.79e-02 | ] |
| T [ | -2.19e-03 | 9.20e-03 | -2.01e-03 | -8.02e-04 | -5.38e-04 | -2.35e-03 | 1.61e-02 | -2.55e-04 | 6.15e-02 | -3.57e-03 | -1.33e-03 | 2.13e-02 | -5.07e-04 | -1.16e-03 | ] |
| A [ | 3466 | 1902 | 3108 | 2824 | 453 | 12408 | 413 | 141 | 1987 | 11734 | 928 | 4578 | 2 | 1997 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 10810 | 16176 | 1366 | 28401 | 32498 | 17769 | 20058 | 33212 | 2363 | 2779 | 11576 | 4202 | 1 | 1979 | ] |
| G [ | 15857 | 1856 | 24269 | 1471 | 214 | 1419 | 407 | 66 | 999 | 13916 | 19415 | 1210 | 33713 | 26624 | ] |
| T [ | 3590 | 13789 | 4981 | 1027 | 558 | 2126 | 12845 | 304 | 28374 | 5295 | 1804 | 23732 | 7 | 3122 | ] |
