This page shows detailed deep learning-derived predictions and motifs for CTCF in testis using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000536.1 |
| Cell line/tissue: | testis |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR494TNM |
| Model: | BPNet |
| A [ | -1.41e-03 | -2.80e-04 | 2.24e-02 | -8.86e-04 | -4.07e-03 | 5.46e-02 | -2.76e-04 | 1.10e-02 | -1.69e-03 | -4.68e-04 | -8.67e-04 | -1.73e-03 | 4.44e-03 | -1.72e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6.96e-02 | 1.27e-01 | -5.38e-04 | 4.87e-02 | 1.43e-02 | -1.19e-04 | -2.14e-05 | 4.92e-06 | 1.69e-04 | -2.25e-05 | 1.29e-05 | 6.44e-02 | -2.52e-04 | 1.86e-02 | ] |
| G [ | -1.05e-03 | -8.89e-05 | 6.37e-03 | 9.60e-03 | -1.44e-03 | 4.78e-04 | 1.21e-01 | 4.90e-02 | 3.30e-02 | 1.10e-01 | 7.13e-02 | -2.82e-04 | 3.80e-02 | 7.65e-03 | ] |
| T [ | -1.49e-03 | -2.62e-04 | -2.87e-03 | -1.02e-03 | 9.72e-03 | -1.25e-03 | -1.35e-04 | -2.03e-04 | 2.01e-03 | -2.88e-04 | -5.95e-04 | -1.88e-03 | -1.60e-03 | -7.61e-04 | ] |
| A [ | 2025 | 20 | 17701 | 1042 | 3805 | 21474 | 158 | 9174 | 1314 | 410 | 1033 | 3628 | 9816 | 2841 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 20909 | 25283 | 817 | 15530 | 10948 | 760 | 36 | 193 | 1263 | 301 | 1307 | 18233 | 1677 | 11857 | ] |
| G [ | 1168 | 10 | 3986 | 8173 | 1844 | 1905 | 25034 | 15727 | 14205 | 24220 | 20843 | 1213 | 12394 | 8036 | ] |
| T [ | 1216 | 6 | 2815 | 574 | 8722 | 1179 | 91 | 225 | 8537 | 388 | 2136 | 2245 | 1432 | 2586 | ] |