This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000537.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR259PNW |
| Model: | BPNet |
| A [ | -1.47e-03 | -3.33e-03 | -3.28e-03 | -3.10e-04 | -4.11e-04 | 8.47e-03 | -4.34e-04 | -2.74e-04 | -2.27e-03 | 2.08e-02 | -1.97e-03 | -5.45e-03 | -6.61e-04 | -2.85e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.37e-02 | 6.29e-02 | -9.41e-04 | 1.27e-01 | 1.86e-01 | 5.69e-02 | 7.24e-02 | 1.87e-01 | 3.83e-04 | -2.03e-03 | 1.32e-02 | 7.48e-03 | -3.32e-04 | -1.78e-03 | ] |
| G [ | 3.79e-02 | -7.66e-04 | 1.12e-01 | 7.58e-06 | -4.92e-05 | -7.43e-05 | -4.20e-05 | -3.10e-05 | -1.96e-04 | 1.65e-02 | 6.65e-02 | -5.40e-04 | 1.80e-01 | 9.12e-02 | ] |
| T [ | -3.59e-03 | 1.13e-02 | -3.35e-03 | -1.35e-03 | -7.43e-04 | -3.21e-03 | 2.23e-02 | -3.77e-04 | 8.17e-02 | -6.23e-03 | -1.74e-03 | 3.04e-02 | -6.32e-04 | -1.72e-03 | ] |
| A [ | 3111 | 1546 | 2645 | 2748 | 269 | 12355 | 292 | 174 | 1860 | 12635 | 1032 | 4132 | 152 | 2283 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 10555 | 16119 | 971 | 28741 | 32751 | 18442 | 19544 | 32956 | 2491 | 2568 | 11114 | 4631 | 141 | 2027 | ] |
| G [ | 16691 | 1467 | 25476 | 1186 | 80 | 1143 | 201 | 75 | 1005 | 13044 | 19445 | 1451 | 32674 | 25940 | ] |
| T [ | 3160 | 14385 | 4426 | 843 | 417 | 1577 | 13480 | 312 | 28161 | 5270 | 1926 | 23303 | 550 | 3267 | ] |