This page shows detailed deep learning-derived predictions and motifs for CTCF in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000541.1 |
| Cell line/tissue: | HCT116 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 MA1929.1 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR954MUZ |
| Model: | BPNet |
| A [ | -2.44e-03 | -2.28e-03 | -7.99e-04 | -1.19e-03 | 1.56e-03 | -7.23e-04 | -2.40e-04 | -1.94e-03 | 2.19e-02 | -1.75e-03 | -5.12e-03 | -6.21e-04 | -1.84e-03 | -4.19e-03 | -1.91e-03 | 9.01e-03 | 1.04e-03 | 3.57e-03 | 1.08e-03 | -5.45e-04 | -1.58e-03 | 2.96e-04 | -2.55e-04 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 2.95e-02 | 3.16e-04 | 7.17e-02 | 1.25e-01 | 5.23e-02 | 8.42e-02 | 1.63e-01 | 1.18e-03 | -1.69e-03 | 1.06e-02 | 3.68e-03 | -3.48e-04 | -1.57e-03 | 1.52e-02 | 9.31e-03 | -1.87e-03 | 1.05e-04 | -7.41e-04 | -2.97e-04 | -1.11e-03 | -6.54e-04 | -1.53e-03 | -2.65e-03 | ] |
| G [ | 1.53e-03 | 5.11e-02 | 1.58e-03 | -3.25e-04 | -3.43e-04 | -1.50e-04 | -1.59e-05 | -3.18e-04 | 1.48e-02 | 5.75e-02 | -1.10e-04 | 1.66e-01 | 1.02e-01 | -2.60e-03 | 5.28e-03 | 1.32e-02 | 3.14e-03 | -9.50e-04 | 3.11e-05 | 3.55e-03 | 6.18e-03 | 1.26e-02 | 2.82e-02 | ] |
| T [ | 4.46e-03 | -1.23e-03 | -1.82e-03 | -1.52e-03 | -4.47e-03 | 7.33e-03 | -3.25e-04 | 7.65e-02 | -3.56e-03 | -1.05e-03 | 2.81e-02 | -7.25e-04 | -1.17e-03 | 6.89e-03 | -4.29e-03 | -4.07e-03 | -1.13e-03 | 4.21e-04 | 7.63e-04 | 3.26e-04 | -2.74e-04 | -1.87e-03 | -2.24e-03 | ] |
| A [ | 4966 | 6236 | 5171 | 2191 | 15642 | 746 | 147 | 2789 | 20155 | 1374 | 8237 | 81 | 2267 | 9527 | 11819 | 20937 | 13883 | 16553 | 14174 | 11871 | 11516 | 13722 | 12445 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 21720 | 4028 | 38845 | 46684 | 29767 | 35373 | 51327 | 3607 | 3037 | 16859 | 5107 | 34 | 1964 | 21416 | 17802 | 6495 | 12532 | 10109 | 10826 | 11568 | 10828 | 8194 | 7201 | ] |
| G [ | 6106 | 31819 | 3936 | 1386 | 2036 | 262 | 46 | 964 | 21203 | 30583 | 2004 | 51164 | 43629 | 5386 | 11567 | 17450 | 13883 | 11638 | 13466 | 14733 | 16576 | 18789 | 23209 | ] |
| T [ | 18965 | 9673 | 3804 | 1495 | 4312 | 15375 | 236 | 44396 | 7361 | 2940 | 36408 | 477 | 3896 | 15427 | 10569 | 6874 | 11458 | 13457 | 13290 | 13583 | 12836 | 11050 | 8901 | ] |
