This page shows detailed deep learning-derived predictions and motifs for CTCF in cardiac muscle cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000547.1 |
| Cell line/tissue: | cardiac muscle cell |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR713SXF |
| Model: | BPNet |
| A [ | -1.14e-03 | -3.21e-03 | -2.76e-03 | -4.69e-04 | -6.41e-04 | 3.20e-03 | -4.74e-04 | -2.58e-04 | -1.87e-03 | 1.85e-02 | -1.71e-03 | -4.95e-03 | -6.97e-04 | -2.54e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.08e-02 | 5.13e-02 | 3.64e-04 | 9.82e-02 | 1.49e-01 | 5.19e-02 | 6.98e-02 | 1.56e-01 | 8.98e-04 | -2.06e-03 | 1.25e-02 | 6.16e-03 | -3.99e-04 | -1.56e-03 | ] |
| G [ | 2.92e-02 | 1.85e-04 | 7.46e-02 | 1.08e-03 | -6.61e-05 | -2.73e-04 | -1.58e-04 | -4.92e-05 | -2.25e-04 | 1.42e-02 | 4.71e-02 | 2.75e-04 | 1.49e-01 | 7.78e-02 | ] |
| T [ | -2.75e-03 | 7.31e-03 | -2.86e-03 | -1.47e-03 | -7.49e-04 | -3.94e-03 | 1.27e-02 | -2.69e-04 | 6.63e-02 | -3.99e-03 | -1.17e-03 | 2.01e-02 | -1.14e-03 | -1.42e-03 | ] |
| A [ | 5146 | 2694 | 4167 | 3862 | 645 | 15295 | 544 | 246 | 3010 | 17052 | 1558 | 7153 | 454 | 3091 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 14355 | 24338 | 2365 | 40486 | 46876 | 28264 | 30538 | 47774 | 4237 | 4275 | 17076 | 8013 | 558 | 3536 | ] |
| G [ | 24179 | 3499 | 34519 | 2686 | 341 | 1927 | 369 | 112 | 1495 | 19947 | 26772 | 2823 | 46162 | 37352 | ] |
| T [ | 4915 | 18064 | 7544 | 1560 | 733 | 3109 | 17144 | 463 | 39853 | 7321 | 3189 | 30605 | 1421 | 4616 | ] |
