Detailed information of deep learning profile BP000548.1

This page shows detailed deep learning-derived predictions and motifs for USF2 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF2
Model ID: BP000548.1
Cell line/tissue: A549
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0526.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15853  
Source: ENCSR563FBT
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.00e-03 -5.10e-04 3.61e-06 7.10e-02 4.30e-06 3.68e-03 -2.30e-04 -2.70e-06 7.14e-03 -1.53e-03 ]
C [ -2.39e-04 1.02e-04 9.27e-02 -8.38e-06 6.84e-02 3.22e-04 1.79e-04 3.31e-06 -6.67e-04 1.08e-02 ]
G [ 3.01e-02 -3.64e-04 6.94e-06 3.16e-05 3.74e-04 5.15e-02 -2.25e-04 9.03e-02 1.87e-03 -4.35e-04 ]
T [ -2.13e-04 2.89e-02 1.93e-08 -4.88e-06 5.51e-04 -1.11e-05 5.77e-02 -1.27e-05 -1.39e-03 2.51e-03 ]

Frequency matrix

A [ 6964 2307 107 28745 39 7547 1131 37 11639 2689 ]
C [ 3790 6906 29707 277 25017 2345 1113 100 5276 13476 ]
G [ 17715 3995 53 533 1658 19794 1014 29496 9384 5388 ]
T [ 1417 16679 19 331 3173 200 26629 253 3587 8332 ]

Other motif patterns

11 profiles found for the same TF (USF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001236.1 USF2 ENCSR513UQG IMR-90 Homo sapiens
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