This page shows detailed deep learning-derived predictions and motifs for CTCF in mammary epithelial cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000549.1 |
| Cell line/tissue: | mammary epithelial cell |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DUS |
| Model: | BPNet |
| A [ | -1.02e-03 | -3.76e-03 | -2.83e-03 | -7.20e-04 | -1.04e-03 | 5.34e-03 | -9.65e-04 | -4.38e-04 | -2.57e-03 | 1.95e-02 | -2.65e-03 | -6.04e-03 | -1.08e-03 | -3.11e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.05e-02 | 5.02e-02 | -3.95e-05 | 1.04e-01 | 1.66e-01 | 5.27e-02 | 8.49e-02 | 1.88e-01 | 9.26e-04 | -2.26e-03 | 1.49e-02 | 7.52e-03 | -5.86e-04 | -2.08e-03 | ] |
| G [ | 2.96e-02 | -1.87e-04 | 7.91e-02 | 1.14e-03 | -1.45e-04 | -1.51e-04 | -2.13e-04 | -3.25e-05 | -2.53e-04 | 1.61e-02 | 5.98e-02 | -8.71e-05 | 1.81e-01 | 9.66e-02 | ] |
| T [ | -3.13e-03 | 1.07e-02 | -3.49e-03 | -2.29e-03 | -1.42e-03 | -5.76e-03 | 1.25e-02 | -5.38e-04 | 7.51e-02 | -5.08e-03 | -2.25e-03 | 2.24e-02 | -1.54e-03 | -2.23e-03 | ] |
| A [ | 7817 | 4458 | 6452 | 5555 | 669 | 22551 | 970 | 112 | 4708 | 22903 | 2385 | 11003 | 418 | 4495 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 19677 | 30249 | 3220 | 52682 | 63055 | 33290 | 39232 | 64339 | 5901 | 6061 | 23173 | 9510 | 310 | 4534 | ] |
| G [ | 29879 | 4545 | 43845 | 3824 | 159 | 2886 | 824 | 30 | 1800 | 25193 | 34530 | 3398 | 62183 | 49039 | ] |
| T [ | 7328 | 25447 | 11182 | 2639 | 817 | 5973 | 23675 | 219 | 52292 | 10543 | 4612 | 40789 | 1789 | 6632 | ] |
