This page shows detailed deep learning-derived predictions and motifs for CTCF in HEK293 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000550.1 |
| Cell line/tissue: | HEK293 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DTW |
| Model: | BPNet |
| A [ | -2.37e-03 | -1.44e-03 | 3.18e-02 | -1.59e-03 | -4.85e-03 | 9.41e-02 | -5.02e-04 | 1.03e-02 | -6.64e-03 | -1.67e-03 | -3.06e-03 | -3.35e-03 | 4.30e-03 | -3.61e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.27e-01 | 2.16e-01 | 7.46e-04 | 7.24e-02 | 2.12e-02 | -5.03e-04 | -3.61e-05 | -2.05e-04 | -4.54e-04 | -2.09e-04 | 2.73e-03 | 8.09e-02 | 1.86e-03 | 3.00e-02 | ] |
| G [ | -2.49e-03 | -7.16e-04 | 5.38e-03 | 1.65e-02 | -2.59e-03 | 2.38e-03 | 2.21e-01 | 1.04e-01 | 7.50e-02 | 1.93e-01 | 1.12e-01 | 1.46e-03 | 5.46e-02 | 1.06e-02 | ] |
| T [ | -3.47e-03 | -1.05e-03 | -6.54e-03 | -2.75e-03 | 2.61e-02 | -2.17e-03 | -3.82e-04 | -8.57e-04 | 3.05e-03 | -1.12e-03 | -1.28e-03 | -3.74e-03 | -3.80e-03 | -3.73e-04 | ] |
| A [ | 2417 | 943 | 32408 | 2959 | 7883 | 38900 | 334 | 15973 | 4561 | 6 | 1964 | 9129 | 18341 | 6008 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 43867 | 47286 | 2223 | 27097 | 18896 | 1284 | 56 | 463 | 1568 | 6 | 3207 | 31609 | 4597 | 21447 | ] |
| G [ | 920 | 90 | 5334 | 16939 | 4069 | 4836 | 47955 | 31352 | 26413 | 48531 | 39201 | 2685 | 21743 | 14855 | ] |
| T [ | 1354 | 239 | 8594 | 1563 | 17710 | 3538 | 213 | 770 | 16016 | 15 | 4186 | 5134 | 3877 | 6248 | ] |
