This page shows detailed deep learning-derived predictions and motifs for CTCF in esophagus muscularis mucosa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000551.1 |
| Cell line/tissue: | esophagus muscularis mucosa |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR073TPC |
| Model: | BPNet |
| A [ | -1.45e-03 | -3.33e-03 | -3.29e-03 | 1.91e-05 | -4.67e-04 | 6.66e-03 | -6.62e-04 | -3.38e-04 | -2.15e-03 | 2.05e-02 | -2.47e-03 | -6.19e-03 | -6.42e-04 | -3.30e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.22e-02 | 5.64e-02 | -1.04e-03 | 1.18e-01 | 1.82e-01 | 5.63e-02 | 7.85e-02 | 1.88e-01 | 7.19e-04 | -2.58e-03 | 1.41e-02 | 6.48e-03 | -3.66e-04 | -2.49e-03 | ] |
| G [ | 3.22e-02 | -8.87e-04 | 9.25e-02 | -3.80e-04 | -1.37e-06 | -2.31e-04 | -2.37e-04 | -1.04e-04 | -3.20e-04 | 1.82e-02 | 5.93e-02 | -5.32e-04 | 1.92e-01 | 9.61e-02 | ] |
| T [ | -2.69e-03 | 9.15e-03 | -2.37e-03 | -1.17e-03 | -6.60e-04 | -4.73e-03 | 1.93e-02 | -5.18e-04 | 8.31e-02 | -5.39e-03 | -1.98e-03 | 2.92e-02 | -1.02e-03 | -1.68e-03 | ] |
| A [ | 3980 | 2218 | 3391 | 3053 | 227 | 14230 | 468 | 179 | 2509 | 14057 | 1373 | 6007 | 56 | 2744 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 12949 | 20621 | 1210 | 36026 | 40505 | 21995 | 24464 | 40669 | 3366 | 3801 | 15105 | 6047 | 76 | 2910 | ] |
| G [ | 19998 | 2094 | 30286 | 1333 | 113 | 2099 | 557 | 78 | 1478 | 16836 | 22195 | 1964 | 40860 | 31476 | ] |
| T [ | 4317 | 16312 | 6358 | 833 | 400 | 2921 | 15756 | 319 | 33893 | 6550 | 2572 | 27228 | 253 | 4116 | ] |
