This page shows detailed deep learning-derived predictions and motifs for CTCF in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000552.1 |
| Cell line/tissue: | HCT116 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR671ITY |
| Model: | BPNet |
| A [ | -2.43e-03 | -2.80e-03 | -9.92e-04 | -1.39e-03 | 2.48e-03 | -7.39e-04 | -1.80e-04 | -1.97e-03 | 2.38e-02 | -1.63e-03 | -6.05e-03 | -4.68e-04 | -1.96e-03 | -4.58e-03 | -1.60e-03 | 9.42e-03 | 1.63e-03 | 4.00e-03 | 1.18e-03 | -8.57e-04 | -1.32e-03 | 4.87e-04 | 1.43e-05 | 3.27e-03 | 2.83e-02 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 3.09e-02 | 8.43e-05 | 7.18e-02 | 1.34e-01 | 5.51e-02 | 9.29e-02 | 1.83e-01 | 1.55e-03 | -1.70e-03 | 1.34e-02 | 4.32e-03 | -2.27e-04 | -1.59e-03 | 1.78e-02 | 9.92e-03 | -2.07e-03 | 2.93e-05 | -1.03e-03 | -7.32e-04 | -2.09e-03 | -8.19e-04 | -1.70e-03 | -3.22e-03 | -1.40e-03 | -1.13e-03 | ] |
| G [ | 1.64e-03 | 5.05e-02 | 2.02e-03 | -3.50e-04 | 3.37e-05 | -1.81e-04 | -4.94e-05 | -3.80e-04 | 1.76e-02 | 6.59e-02 | -4.33e-04 | 1.89e-01 | 1.18e-01 | -2.94e-03 | 6.67e-03 | 1.50e-02 | 3.37e-03 | -3.84e-04 | 7.20e-04 | 4.38e-03 | 7.05e-03 | 1.39e-02 | 3.12e-02 | 1.25e-03 | -2.97e-03 | ] |
| T [ | 3.82e-03 | 1.97e-04 | -2.05e-03 | -1.79e-03 | -4.84e-03 | 8.60e-03 | -3.06e-04 | 8.80e-02 | -3.24e-03 | -1.34e-03 | 3.25e-02 | -1.00e-03 | -1.51e-03 | 7.59e-03 | -5.22e-03 | -4.63e-03 | -1.22e-03 | 6.78e-04 | 9.19e-04 | 1.08e-03 | -8.11e-04 | -2.41e-03 | -2.57e-03 | 1.80e-03 | -6.11e-04 | ] |
| A [ | 2999 | 3942 | 3082 | 462 | 8916 | 190 | 0 | 641 | 10607 | 611 | 4075 | 1 | 806 | 5354 | 6441 | 11866 | 7777 | 9017 | 7599 | 6446 | 6283 | 7526 | 6759 | 8510 | 12854 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11479 | 2373 | 20385 | 26762 | 15702 | 19609 | 27773 | 810 | 1506 | 9079 | 2056 | 0 | 804 | 11290 | 9723 | 3207 | 6642 | 5224 | 5776 | 6225 | 5737 | 4306 | 3851 | 6004 | 5814 | ] |
| G [ | 3593 | 15064 | 2401 | 283 | 850 | 54 | 0 | 205 | 11733 | 16694 | 567 | 27772 | 24602 | 2728 | 6055 | 9079 | 7303 | 6047 | 7030 | 7710 | 8619 | 10062 | 12258 | 6784 | 4153 | ] |
| T [ | 9702 | 6393 | 1906 | 266 | 2305 | 7920 | 0 | 26117 | 3927 | 1388 | 21074 | 0 | 1561 | 8402 | 5553 | 3621 | 6052 | 7485 | 7369 | 7392 | 7134 | 5879 | 4905 | 6475 | 4953 | ] |
