Detailed information of deep learning profile BP000555.1

This page shows detailed deep learning-derived predictions and motifs for HLF in HepG2 using a single trained BPNet model.

Model details

Name: HLF
Model ID: BP000555.1
Cell line/tissue: HepG2
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
Best Match(es): MA0043.3 MA0043.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q16534  
Source: ENCSR528PSI
Model: BPNet

Contribution weight matrix (CWM)

A [ 7.53e-03 -5.28e-06 -2.89e-06 7.68e-02 -3.77e-04 9.38e-03 -2.26e-04 1.24e-01 1.14e-01 -1.25e-03 ]
C [ 3.06e-04 -9.50e-06 -2.18e-05 -9.16e-05 4.37e-03 -2.32e-04 2.72e-02 3.21e-05 -2.18e-06 2.03e-02 ]
G [ 2.20e-02 -2.91e-06 1.83e-03 7.05e-03 -6.47e-04 7.06e-02 -1.68e-04 -2.75e-07 -5.81e-05 -1.94e-05 ]
T [ -1.32e-03 1.18e-01 1.02e-01 -1.05e-04 5.50e-02 -3.01e-04 4.00e-02 -9.12e-07 -1.44e-05 9.33e-03 ]

Frequency matrix

A [ 33011 166 68 80762 1790 24589 3662 102720 100848 6828 ]
C [ 19515 701 757 2033 8509 2139 42535 17 213 42261 ]
G [ 43370 117 10265 17820 5054 74281 1367 1 1312 18936 ]
T [ 6842 101754 91648 2123 87385 1729 55175 0 364 34712 ]

Alternative motif patterns (AMPs)