Detailed information of deep learning profile BP000556.1

This page shows detailed deep learning-derived predictions and motifs for NR2F2 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR2F2
Model ID: BP000556.1
Cell line/tissue: MCF-7
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Best Match(es): MA1111.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P24468  
Source: ENCSR000BUY
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.32e-03 7.65e-04 -1.78e-05 2.11e-04 5.52e-02 -5.92e-05 -1.49e-05 -3.61e-06 ]
C [ 4.81e-03 8.83e-04 9.68e-05 -2.57e-05 5.95e-05 5.98e-02 5.75e-02 4.01e-03 ]
G [ 3.79e-03 5.79e-04 -1.24e-05 5.47e-02 -1.12e-05 0.00e+00 0.00e+00 -2.35e-06 ]
T [ 1.65e-03 2.06e-03 4.79e-02 1.88e-06 0.00e+00 3.55e-05 -4.33e-06 2.74e-02 ]

Frequency matrix

A [ 20265 20521 1392 12148 99255 6542 7464 1794 ]
C [ 39715 41856 6713 5554 17457 114085 111408 33704 ]
G [ 24758 26009 761 105209 6724 47 84 2101 ]
T [ 38780 35131 114652 607 82 2843 4562 85919 ]

Alternative motif patterns (AMPs)

4 profiles found for the same TF (NR2F2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000246.1 NR2F2 ENCSR338MMB liver Homo sapiens
BP000449.1 NR2F2 ENCSR000BRS K562 Homo sapiens
BP001097.1 NR2F2 ENCSR000BVM HepG2 Homo sapiens
BP001144.1 NR2F2 ENCSR168SMX liver Homo sapiens
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