Detailed information of deep learning profile BP000563.1

This page shows detailed deep learning-derived predictions and motifs for GABPA in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: GABPA
Model ID: BP000563.1
Cell line/tissue: K562
Class: Tryptophan cluster factors
Family: Ets-related
Best Match(es): MA0062.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q06546  
Source: ENCSR000BLO
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.18e-02 -9.73e-05 3.81e-04 -6.60e-06 3.34e-06 2.22e-05 -2.39e-05 -3.44e-04 ]
C [ -2.30e-04 3.49e-02 1.97e-05 2.56e-05 1.04e-01 1.19e-01 2.36e-06 1.20e-03 ]
G [ 3.81e-03 8.25e-04 1.43e-04 6.18e-05 2.53e-05 7.56e-06 7.07e-02 3.59e-02 ]
T [ -1.38e-03 1.32e-03 5.73e-02 9.41e-02 2.60e-05 3.16e-06 -1.20e-04 -2.23e-04 ]

Frequency matrix

A [ 14395 1273 3718 618 35 1 215 1252 ]
C [ 6953 23990 1885 1374 38285 38417 2059 10006 ]
G [ 12818 6063 2991 804 59 10 26700 23730 ]
T [ 4270 7110 29841 35640 57 8 9461 3447 ]

13 profiles found for the same TF (GABPA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000192.1 GABPA ENCSR000BIW H1 Homo sapiens
BP000204.1 GABPA ENCSR350ORK liver Homo sapiens
BP000323.1 GABPA ENCSR269TNX HepG2 Homo sapiens
BP000347.1 GABPA ENCSR331HPA GM12878 Homo sapiens
BP000391.1 GABPA ENCSR038RXU MCF-7 Homo sapiens
BP000406.1 GABPA ENCSR000BTG SK-N-SH Homo sapiens
BP000582.1 GABPA ENCSR000BUK MCF-7 Homo sapiens
BP000699.1 GABPA ENCSR000BTK HL-60 Homo sapiens
BP000823.1 GABPA ENCSR000BJK HepG2 Homo sapiens
BP000840.1 GABPA ENCSR038GMB liver Homo sapiens
Showing 10 profiles of page 1 from 2 pages