Detailed information of deep learning profile BP000563.1

This page shows detailed deep learning-derived predictions and motifs for GABPA in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: GABPA
Model ID: BP000563.1
Cell line/tissue: K562
Class: Tryptophan cluster factors
Family: Ets-related
Best Match(es): MA0062.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q06546  
Source: ENCSR000BLO
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.18e-02 -9.73e-05 3.81e-04 -6.60e-06 3.34e-06 2.22e-05 -2.39e-05 -3.44e-04 ]
C [ -2.30e-04 3.49e-02 1.97e-05 2.56e-05 1.04e-01 1.19e-01 2.36e-06 1.20e-03 ]
G [ 3.81e-03 8.25e-04 1.43e-04 6.18e-05 2.53e-05 7.56e-06 7.07e-02 3.59e-02 ]
T [ -1.38e-03 1.32e-03 5.73e-02 9.41e-02 2.60e-05 3.16e-06 -1.20e-04 -2.23e-04 ]

Frequency matrix

A [ 14395 1273 3718 618 35 1 215 1252 ]
C [ 6953 23990 1885 1374 38285 38417 2059 10006 ]
G [ 12818 6063 2991 804 59 10 26700 23730 ]
T [ 4270 7110 29841 35640 57 8 9461 3447 ]

13 profiles found for the same TF (GABPA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000852.1 GABPA ENCSR290MUH K562 Homo sapiens
BP001058.1 GABPA ENCSR000BHS HeLa-S3 Homo sapiens
BP001108.1 GABPA ENCSR000BPY A549 Homo sapiens
Showing 3 profiles of page 2 from 2 pages