This page shows detailed deep learning-derived predictions and motifs for CTCF in transverse colon using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000566.1 |
| Cell line/tissue: | transverse colon |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR833FWC |
| Model: | BPNet |
| A [ | -1.81e-03 | -5.61e-04 | 2.50e-02 | -1.94e-03 | -4.82e-03 | 7.62e-02 | -4.12e-04 | 1.35e-02 | -3.21e-03 | -8.03e-04 | -1.12e-03 | -2.11e-03 | 6.83e-03 | -2.21e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.53e-02 | 1.76e-01 | -4.18e-04 | 6.68e-02 | 1.67e-02 | -2.39e-04 | -1.89e-05 | -6.62e-05 | -7.10e-06 | -4.93e-05 | 3.96e-04 | 7.05e-02 | -2.31e-04 | 2.21e-02 | ] |
| G [ | -1.43e-03 | -1.58e-04 | 6.14e-03 | 1.41e-02 | -1.82e-03 | 1.16e-03 | 1.70e-01 | 6.93e-02 | 4.62e-02 | 1.40e-01 | 8.89e-02 | -2.41e-04 | 4.09e-02 | 1.04e-02 | ] |
| T [ | -2.63e-03 | -4.27e-04 | -5.10e-03 | -1.72e-03 | 1.84e-02 | -2.01e-03 | -1.94e-04 | -4.76e-04 | 4.12e-03 | -5.28e-04 | -6.38e-04 | -2.26e-03 | -2.32e-03 | -8.15e-04 | ] |
| A [ | 3112 | 0 | 23567 | 1902 | 5269 | 28894 | 239 | 12478 | 2213 | 161 | 1033 | 5170 | 13673 | 3819 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 27184 | 34231 | 1429 | 19532 | 14374 | 912 | 45 | 165 | 1554 | 33 | 1414 | 24708 | 2275 | 16130 | ] |
| G [ | 1979 | 0 | 4651 | 11871 | 2720 | 2576 | 33820 | 21361 | 18270 | 33929 | 29149 | 1373 | 16230 | 10765 | ] |
| T [ | 1956 | 0 | 4584 | 926 | 11867 | 1850 | 127 | 227 | 12194 | 108 | 2635 | 2980 | 2053 | 3516 | ] |
