Detailed information of deep learning profile BP000567.1

This page shows detailed deep learning-derived predictions and motifs for CUX1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CUX1
Model ID: BP000567.1
Cell line/tissue: K562
Class: Homeo domain factors
Family: HD-CUT
Best Match(es): MA0754.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P31271  
Source: ENCSR178NTX
Model: BPNet

Contribution weight matrix (CWM)

A [ -3.84e-04 2.48e-02 -4.68e-05 -6.19e-05 5.38e-05 2.78e-02 -2.68e-05 1.60e-03 7.87e-03 ]
C [ -3.32e-04 -3.80e-06 1.42e-05 7.81e-03 1.24e-05 -1.09e-05 -5.64e-06 2.89e-03 -3.33e-04 ]
G [ 9.03e-04 1.75e-08 -1.56e-05 2.86e-04 3.71e-02 3.01e-05 2.49e-04 -2.14e-04 4.24e-04 ]
T [ 6.66e-03 -3.64e-05 2.19e-02 7.13e-03 -1.66e-05 -2.32e-05 2.82e-02 1.55e-03 -1.20e-03 ]

Frequency matrix

A [ 1704 7234 229 1095 131 7091 163 2442 3406 ]
C [ 729 104 573 1187 2 194 162 1531 814 ]
G [ 1911 183 186 178 7598 362 88 612 1637 ]
T [ 3398 221 6754 5281 11 95 7329 3157 1885 ]

Alternative motif patterns (AMPs)

3 profiles found for the same TF (CUX1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000433.1 CUX1 ENCSR000DYR GM12878 Homo sapiens
BP000446.1 CUX1 ENCSR000EFO K562 Homo sapiens
BP000522.1 CUX1 ENCSR017CEO MCF-7 Homo sapiens
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