Detailed information of deep learning profile BP000567.1

This page shows detailed deep learning-derived predictions and motifs for CUX1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CUX1
Model ID: BP000567.1
Cell line/tissue: K562
Class: Homeo domain factors
Family: HD-CUT
Best Match(es): MA0754.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P31271  
Source: ENCSR178NTX
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.20e-03 1.55e-03 2.82e-02 -2.32e-05 -1.66e-05 7.13e-03 2.19e-02 -3.64e-05 6.66e-03 ]
C [ 4.24e-04 -2.14e-04 2.49e-04 3.01e-05 3.71e-02 2.86e-04 -1.56e-05 1.75e-08 9.03e-04 ]
G [ -3.33e-04 2.89e-03 -5.64e-06 -1.09e-05 1.24e-05 7.81e-03 1.42e-05 -3.80e-06 -3.32e-04 ]
T [ 7.87e-03 1.60e-03 -2.68e-05 2.78e-02 5.38e-05 -6.19e-05 -4.68e-05 2.48e-02 -3.84e-04 ]

Frequency matrix

A [ 1885 3157 7329 95 11 5281 6754 221 3398 ]
C [ 1637 612 88 362 7598 178 186 183 1911 ]
G [ 814 1531 162 194 2 1187 573 104 729 ]
T [ 3406 2442 163 7091 131 1095 229 7234 1704 ]

Alternative motif patterns (AMPs)

3 profiles found for the same TF (CUX1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000433.1 CUX1 ENCSR000DYR GM12878 Homo sapiens
BP000446.1 CUX1 ENCSR000EFO K562 Homo sapiens
BP000522.1 CUX1 ENCSR017CEO MCF-7 Homo sapiens
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