This page shows detailed deep learning-derived predictions and motifs for CTCF in DND-41 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000570.1 |
| Cell line/tissue: | DND-41 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000AQU |
| Model: | BPNet |
| A [ | -1.87e-04 | -3.57e-03 | -3.19e-03 | -4.85e-04 | -7.87e-04 | 7.77e-03 | -7.32e-04 | -4.16e-04 | -2.36e-03 | 1.88e-02 | -2.20e-03 | -4.52e-03 | -9.90e-04 | -2.93e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.85e-03 | 5.41e-02 | -1.61e-04 | 1.13e-01 | 1.65e-01 | 5.64e-02 | 8.73e-02 | 1.80e-01 | 1.64e-03 | -1.92e-03 | 1.30e-02 | 4.84e-03 | -6.23e-04 | -1.94e-03 | ] |
| G [ | 3.46e-02 | 1.46e-04 | 8.62e-02 | 1.42e-03 | -1.16e-04 | -3.30e-04 | -1.94e-04 | -9.84e-05 | -3.55e-04 | 1.53e-02 | 5.36e-02 | 4.62e-04 | 1.66e-01 | 8.63e-02 | ] |
| T [ | -2.76e-03 | 1.07e-02 | -3.28e-03 | -2.10e-03 | -1.05e-03 | -5.11e-03 | 1.48e-02 | -3.99e-04 | 7.24e-02 | -4.43e-03 | -1.21e-03 | 2.70e-02 | -1.18e-03 | -1.38e-03 | ] |
| A [ | 8651 | 4788 | 7008 | 5873 | 1210 | 22629 | 1081 | 552 | 5748 | 24482 | 2985 | 12633 | 878 | 4920 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 20348 | 33856 | 4062 | 56898 | 67167 | 39014 | 45293 | 68823 | 7605 | 7013 | 25101 | 9872 | 1036 | 6001 | ] |
| G [ | 33455 | 5517 | 47763 | 4740 | 558 | 2955 | 811 | 145 | 2606 | 27364 | 36820 | 4957 | 65591 | 51987 | ] |
| T [ | 7823 | 26117 | 11443 | 2767 | 1342 | 5679 | 23092 | 757 | 54319 | 11418 | 5370 | 42815 | 2772 | 7369 | ] |