This page shows detailed deep learning-derived predictions and motifs for CTCF in mucosa of descending colon using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000571.1 |
| Cell line/tissue: | mucosa of descending colon |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR038VWU |
| Model: | BPNet |
| A [ | -8.43e-04 | -1.98e-03 | -2.54e-03 | -5.31e-04 | -3.31e-04 | 3.40e-03 | -2.92e-04 | -1.75e-04 | -1.50e-03 | 1.38e-02 | -1.23e-03 | -3.88e-03 | -3.98e-04 | -2.17e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.38e-03 | 5.39e-02 | -1.12e-04 | 9.11e-02 | 1.33e-01 | 4.22e-02 | 5.80e-02 | 1.41e-01 | 1.27e-04 | -1.97e-03 | 7.77e-03 | 7.53e-03 | -1.78e-04 | -1.01e-03 | ] |
| G [ | 2.65e-02 | -6.07e-04 | 7.90e-02 | 2.28e-04 | -7.78e-06 | 1.60e-05 | -4.48e-05 | -1.43e-05 | -1.88e-04 | 1.38e-02 | 5.00e-02 | -4.19e-04 | 1.42e-01 | 7.70e-02 | ] |
| T [ | -2.49e-03 | 6.08e-03 | -2.36e-03 | -1.00e-03 | -4.72e-04 | -2.48e-03 | 1.42e-02 | -2.72e-04 | 6.71e-02 | -4.32e-03 | -9.50e-04 | 2.27e-02 | -4.90e-04 | -1.88e-03 | ] |
| A [ | 1891 | 893 | 1601 | 1639 | 143 | 7741 | 180 | 23 | 942 | 7959 | 519 | 2695 | 62 | 1296 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7205 | 12524 | 623 | 20140 | 22660 | 13361 | 13959 | 23014 | 1353 | 1888 | 7799 | 3893 | 79 | 1341 | ] |
| G [ | 11963 | 861 | 17966 | 766 | 60 | 893 | 130 | 10 | 658 | 9989 | 13590 | 887 | 22710 | 18518 | ] |
| T [ | 2032 | 8815 | 2901 | 546 | 229 | 1097 | 8823 | 45 | 20139 | 3255 | 1184 | 15617 | 241 | 1937 | ] |
