Detailed information of deep learning profile BP000573.1

This page shows detailed deep learning-derived predictions and motifs for ATF4 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ATF4
Model ID: BP000573.1
Cell line/tissue: HepG2
Class: Basic leucine zipper factors (bZIP)
Family: ATF-4-related factors
Best Match(es): MA0833.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P18848  
Source: ENCSR288ZFV
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.01e-03 5.27e-06 -7.22e-06 4.30e-06 8.83e-07 4.58e-03 2.64e-05 9.35e-06 5.77e-03 -8.25e-06 -1.65e-04 ]
C [ -6.44e-05 0.00e+00 5.84e-06 0.00e+00 8.92e-03 -7.32e-06 -4.33e-06 4.83e-03 0.00e+00 -7.74e-05 1.41e-03 ]
G [ 6.40e-04 -9.75e-07 -1.83e-06 7.72e-03 0.00e+00 4.03e-04 0.00e+00 -1.60e-06 9.43e-07 8.81e-04 -3.54e-05 ]
T [ -3.50e-05 5.99e-03 6.58e-03 -2.35e-06 8.30e-07 -6.38e-06 4.78e-03 1.61e-06 -7.85e-06 8.07e-04 -4.69e-05 ]

Frequency matrix

A [ 591 60 9 0 5 931 135 102 1048 79 162 ]
C [ 155 21 11 0 1143 43 113 967 48 192 504 ]
G [ 353 21 44 1161 2 140 57 35 22 384 199 ]
T [ 62 1059 1097 0 11 47 856 57 43 506 296 ]

Alternative motif patterns (AMPs)

4 profiles found for the same TF (ATF4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000464.1 ATF4 ENCSR803PAI HepG2 Homo sapiens
BP000520.1 ATF4 ENCSR044UJJ K562 Homo sapiens
BP001152.1 ATF4 ENCSR145TSJ K562 Homo sapiens
BP001160.1 ATF4 ENCSR965SHB HepG2 Homo sapiens
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