Detailed information of deep learning profile BP000574.1

This page shows detailed deep learning-derived predictions and motifs for RELA in GM15510 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: RELA
Model ID: BP000574.1
Cell line/tissue: GM15510
Class: Rel homology region (RHR) factors
Family: NF-kappaB-related factors
Best Match(es): MA0107.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q04206  
Source: ENCSR000EAQ
Model: BPNet

Contribution weight matrix (CWM)

A [ -5.02e-04 -1.83e-05 -1.67e-05 9.51e-03 1.09e-02 1.81e-03 -5.87e-05 -1.89e-04 -8.37e-05 -2.92e-04 -3.61e-03 ]
C [ 1.72e-04 9.64e-06 6.04e-06 -3.76e-04 -3.90e-04 -3.45e-04 -9.16e-05 6.98e-03 5.70e-02 5.28e-02 1.59e-02 ]
G [ 4.48e-02 7.09e-02 5.56e-02 1.86e-02 4.77e-04 -1.71e-04 -8.81e-05 -2.94e-04 -1.16e-05 1.34e-05 1.14e-03 ]
T [ -9.38e-04 -3.32e-05 7.07e-04 -6.36e-04 -1.71e-04 3.21e-02 4.97e-02 2.72e-02 7.22e-04 -3.77e-04 -2.86e-03 ]

Frequency matrix

A [ 786 52 258 5849 6695 2401 348 663 471 825 4613 ]
C [ 722 76 114 1199 4642 1160 779 5085 15387 14645 7433 ]
G [ 14413 17265 15338 8874 3016 1042 936 771 169 412 2377 ]
T [ 1606 134 1817 1606 3174 12924 15464 11008 1500 1645 3104 ]

7 profiles found for the same TF (RELA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000234.1 RELA ENCSR000EBD GM18951 Homo sapiens
BP000324.1 RELA ENCSR000EAI GM12891 Homo sapiens
BP000338.1 RELA ENCSR000EBM GM19193 Homo sapiens
BP000357.1 RELA ENCSR000EAG GM12878 Homo sapiens
BP000485.1 RELA ENCSR580HOI HepG2 Homo sapiens
BP000725.1 RELA ENCSR000EAN GM12892 Homo sapiens
BP000749.1 RELA ENCSR664POU GM12878 Homo sapiens
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