Detailed information of deep learning profile BP000575.1

This page shows detailed deep learning-derived predictions and motifs for NRF1 in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NRF1
Model ID: BP000575.1
Cell line/tissue: HeLa-S3
Class: Uncharacterized
Family: NRF
Best Match(es): MA0506.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q5ZL67  
Source: ENCSR000EDJ
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.40e-03 5.10e-04 -4.87e-05 -1.35e-04 3.00e-07 6.92e-02 -2.01e-03 -2.26e-04 -4.21e-04 -2.59e-04 -2.69e-04 1.17e-02 ]
C [ 2.76e-03 -1.26e-04 1.04e-01 -6.11e-06 8.75e-02 -2.21e-04 -2.17e-03 -7.64e-04 8.10e-02 -1.19e-03 5.38e-02 -3.10e-03 ]
G [ -3.12e-03 8.14e-02 -3.94e-05 1.10e-01 -2.20e-05 2.96e-05 -9.69e-03 6.88e-02 -3.13e-04 6.61e-02 -6.86e-04 2.46e-03 ]
T [ 2.12e-02 -7.60e-05 -2.75e-05 -2.43e-05 4.15e-06 -5.55e-05 2.01e-02 -1.29e-04 -6.55e-04 -1.41e-03 1.51e-03 -1.54e-03 ]

Frequency matrix

A [ 565 439 30 28 59 5642 608 414 290 313 359 2213 ]
C [ 2009 30 6960 4 6717 511 1070 725 5677 781 5084 1655 ]
G [ 1071 6493 3 6954 84 642 2565 5416 447 5138 554 2249 ]
T [ 3348 31 0 7 133 198 2751 438 579 761 996 877 ]

11 profiles found for the same TF (NRF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000371.1 NRF1 ENCSR000EHH K562 Homo sapiens
BP000443.1 NRF1 ENCSR135ANT MCF-7 Homo sapiens
BP000502.1 NRF1 ENCSR689JMY HepG2 Homo sapiens
BP000505.1 NRF1 ENCSR998AJK K562 Homo sapiens
BP000586.1 NRF1 ENCSR837EYC K562 Homo sapiens
BP000819.1 NRF1 ENCSR000DZO GM12878 Homo sapiens
BP000972.1 NRF1 ENCSR494TDU K562 Homo sapiens
BP001109.1 NRF1 ENCSR000EEH HepG2 Homo sapiens
BP001112.1 NRF1 ENCSR000ECC H1 Homo sapiens
BP001198.1 NRF1 ENCSR000EHZ SK-N-SH Homo sapiens
Showing 10 profiles of page 1 from 2 pages