This page shows detailed deep learning-derived predictions and motifs for HNF4A in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | HNF4A |
| Model ID: | BP000577.1 |
| Cell line/tissue: | liver |
| Class: | Nuclear receptors with C4 zinc fingers |
| Family: | RXR-related receptors (NR2) |
| Best Match(es): | MA0114.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P41235 |
| Source: | ENCSR445QRF |
| Model: | BPNet |
| A [ | 1.01e-02 | -1.15e-03 | -1.26e-03 | -3.10e-03 | -1.57e-04 | 7.89e-02 | 6.49e-02 | 6.69e-02 | 1.10e-05 | -8.92e-04 | -1.74e-03 | -2.90e-04 | 3.04e-02 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | -2.58e-04 | -1.04e-03 | -1.21e-03 | 1.16e-02 | 8.65e-02 | -1.89e-04 | -4.87e-04 | -3.73e-05 | 4.63e-07 | -3.25e-04 | 2.28e-02 | 7.74e-02 | -5.55e-04 | ] |
| G [ | 1.31e-02 | 6.47e-02 | 1.53e-02 | 5.22e-04 | -3.80e-04 | 3.91e-04 | -7.43e-05 | 1.48e-03 | 1.17e-01 | 1.68e-02 | -7.80e-04 | -6.20e-04 | 1.73e-03 | ] |
| T [ | -2.20e-03 | -9.61e-04 | 1.13e-02 | 5.63e-03 | 4.33e-04 | -3.93e-04 | -7.35e-04 | -1.16e-04 | -2.35e-05 | 4.72e-02 | 1.56e-02 | 1.32e-03 | -3.15e-03 | ] |
| A [ | 30945 | 11719 | 16097 | 13607 | 2342 | 69348 | 59875 | 67191 | 5 | 4124 | 5770 | 2724 | 50748 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 5815 | 3495 | 6803 | 21679 | 63115 | 1982 | 2127 | 185 | 1 | 1032 | 30158 | 59548 | 6665 | ] |
| G [ | 25723 | 49376 | 28406 | 17671 | 2646 | 2578 | 11355 | 6937 | 75307 | 23117 | 10059 | 1891 | 8352 | ] |
| T [ | 12834 | 10726 | 24012 | 22360 | 7214 | 1409 | 1960 | 1004 | 4 | 47044 | 29331 | 11154 | 9552 | ] |
