This page shows detailed deep learning-derived predictions and motifs for CTCF in breast epithelium using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000578.1 |
| Cell line/tissue: | breast epithelium |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR661NXJ |
| Model: | BPNet |
| A [ | -8.99e-04 | -2.02e-03 | -2.66e-03 | -4.83e-04 | -2.62e-04 | 8.00e-03 | -3.65e-04 | -2.01e-04 | -1.67e-03 | 1.74e-02 | -1.56e-03 | -3.85e-03 | -4.18e-04 | -2.46e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.08e-02 | 4.34e-02 | -6.93e-04 | 9.41e-02 | 1.46e-01 | 4.11e-02 | 5.90e-02 | 1.56e-01 | 2.17e-04 | -1.84e-03 | 1.17e-02 | 5.35e-03 | -1.31e-04 | -1.44e-03 | ] |
| G [ | 2.36e-02 | -6.10e-04 | 7.65e-02 | 3.06e-06 | -1.47e-05 | 4.44e-05 | -2.89e-08 | -4.56e-06 | -1.48e-04 | 1.46e-02 | 6.22e-02 | -7.65e-04 | 1.63e-01 | 8.91e-02 | ] |
| T [ | -2.32e-03 | 6.63e-03 | -1.50e-03 | -8.90e-04 | -4.36e-04 | -2.47e-03 | 1.75e-02 | -3.00e-04 | 6.95e-02 | -4.92e-03 | -1.52e-03 | 2.35e-02 | -5.53e-04 | -1.60e-03 | ] |
| A [ | 2687 | 1484 | 2266 | 2112 | 149 | 10888 | 289 | 62 | 1516 | 10022 | 758 | 3693 | 91 | 1737 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9380 | 14082 | 833 | 25256 | 28392 | 14912 | 16829 | 28625 | 1942 | 2379 | 9733 | 4161 | 78 | 1686 | ] |
| G [ | 13764 | 1466 | 21791 | 824 | 79 | 1401 | 295 | 44 | 907 | 11989 | 16845 | 1152 | 28421 | 22806 | ] |
| T [ | 3034 | 11834 | 3975 | 673 | 245 | 1664 | 11452 | 134 | 24500 | 4475 | 1529 | 19859 | 275 | 2636 | ] |
