This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000579.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR378KET |
| Model: | BPNet |
| A [ | -1.72e-03 | -3.93e-03 | -4.05e-03 | -3.33e-04 | -5.65e-04 | 8.71e-03 | -4.96e-04 | -3.11e-04 | -2.95e-03 | 2.35e-02 | -2.25e-03 | -6.61e-03 | -7.02e-04 | -3.36e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.41e-02 | 6.42e-02 | -1.03e-03 | 1.33e-01 | 2.00e-01 | 6.34e-02 | 7.28e-02 | 2.05e-01 | 7.92e-04 | -2.55e-03 | 1.36e-02 | 8.17e-03 | -3.23e-04 | -1.93e-03 | ] |
| G [ | 3.73e-02 | -9.24e-04 | 1.14e-01 | 1.94e-04 | -2.14e-05 | 2.66e-04 | 3.03e-05 | -4.22e-05 | -7.35e-05 | 1.85e-02 | 6.70e-02 | -8.15e-04 | 1.95e-01 | 9.78e-02 | ] |
| T [ | -3.58e-03 | 1.05e-02 | -3.75e-03 | -1.55e-03 | -7.14e-04 | -4.30e-03 | 2.28e-02 | -4.55e-04 | 8.04e-02 | -6.43e-03 | -2.05e-03 | 2.92e-02 | -9.35e-04 | -1.89e-03 | ] |
| A [ | 3885 | 1921 | 3111 | 3208 | 325 | 13430 | 413 | 187 | 2316 | 14197 | 1270 | 5027 | 24 | 2620 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 12078 | 18641 | 1335 | 32473 | 37262 | 21022 | 22366 | 37618 | 3165 | 3272 | 13238 | 5545 | 29 | 2592 | ] |
| G [ | 18523 | 1939 | 28392 | 1556 | 113 | 1728 | 438 | 64 | 1346 | 14766 | 21438 | 1762 | 38093 | 29318 | ] |
| T [ | 3719 | 15704 | 5368 | 968 | 505 | 2025 | 14988 | 336 | 31379 | 5970 | 2259 | 25872 | 59 | 3674 | ] |
