This page shows detailed deep learning-derived predictions and motifs for CTCF in right atrium auricular region using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000580.1 |
| Cell line/tissue: | right atrium auricular region |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR401KRN |
| Model: | BPNet |
| A [ | -1.59e-03 | -4.90e-04 | 2.39e-02 | -1.05e-03 | -4.39e-03 | 6.11e-02 | -2.58e-04 | 1.46e-02 | -2.03e-03 | -4.62e-04 | -7.51e-04 | -2.00e-03 | 7.69e-03 | -2.40e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.41e-02 | 1.32e-01 | -4.77e-04 | 4.96e-02 | 1.28e-02 | -1.94e-04 | -3.52e-05 | -4.41e-05 | -1.10e-04 | -3.27e-05 | -4.13e-05 | 7.39e-02 | -6.26e-04 | 2.40e-02 | ] |
| G [ | -1.13e-03 | -1.82e-04 | 5.89e-03 | 7.55e-03 | -1.80e-03 | 1.78e-04 | 1.32e-01 | 5.10e-02 | 3.87e-02 | 1.33e-01 | 8.74e-02 | -3.18e-04 | 4.81e-02 | 1.08e-02 | ] |
| T [ | -2.21e-03 | -3.81e-04 | -3.42e-03 | -1.19e-03 | 1.47e-02 | -1.45e-03 | -1.85e-04 | -2.90e-04 | 3.53e-03 | -3.25e-04 | -7.28e-04 | -2.32e-03 | -2.16e-03 | -1.01e-03 | ] |
| A [ | 2322 | 531 | 17816 | 1332 | 3855 | 22362 | 211 | 10149 | 1281 | 302 | 702 | 3547 | 10253 | 2500 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 21141 | 25655 | 1121 | 15838 | 11017 | 967 | 77 | 260 | 1086 | 106 | 990 | 20128 | 1210 | 13592 | ] |
| G [ | 1554 | 177 | 4587 | 8651 | 2225 | 1929 | 26111 | 15857 | 14912 | 25909 | 22799 | 829 | 13891 | 8149 | ] |
| T [ | 1498 | 152 | 2991 | 694 | 9418 | 1257 | 116 | 249 | 9236 | 198 | 2025 | 2011 | 1161 | 2274 | ] |