Detailed information of deep learning profile BP000581.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000581.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR691GRA
Model: BPNet

Contribution weight matrix (CWM)

A [ 7.37e-03 -6.37e-05 3.52e-03 4.77e-02 9.84e-07 2.48e-02 -1.04e-03 2.80e-03 3.43e-03 -2.14e-03 9.58e-05 -2.74e-04 9.08e-04 -4.84e-04 -1.83e-03 ]
C [ -4.71e-05 -1.88e-06 -1.39e-03 -4.02e-04 8.32e-02 -2.99e-04 7.90e-04 -1.05e-03 2.14e-03 2.23e-03 -7.25e-05 -4.52e-05 -9.07e-04 4.19e-02 8.37e-03 ]
G [ 3.55e-03 5.98e-02 -1.46e-03 -4.33e-04 0.00e+00 1.26e-03 2.30e-03 -9.64e-04 2.59e-04 -1.23e-03 7.38e-02 -1.13e-04 -9.63e-04 -3.18e-04 6.98e-05 ]
T [ -1.81e-03 7.39e-06 2.48e-03 -5.64e-04 1.75e-05 -1.17e-03 2.41e-03 1.78e-03 -8.97e-04 2.04e-02 8.68e-06 5.11e-02 5.32e-03 -1.24e-03 4.98e-03 ]

Frequency matrix

A [ 4845 160 4200 8976 1 7924 1823 3254 2827 2174 37 1078 2350 1676 1795 ]
C [ 162 11 1302 205 10225 254 2559 1899 2884 630 16 540 2257 6305 3462 ]
G [ 3349 9920 2088 294 0 476 3031 2054 2615 670 10168 549 1756 384 692 ]
T [ 1874 139 2640 755 4 1576 2817 3022 1904 6757 9 8063 3867 1865 4281 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000789.1 NR3C1 ENCSR000BHE A549 Homo sapiens
BP000837.1 NR3C1 ENCSR287FWE A549 Homo sapiens
BP000919.1 NR3C1 ENCSR908AOO A549 Homo sapiens
BP000983.1 NR3C1 ENCSR000BJC Ishikawa Homo sapiens
BP001035.1 NR3C1 ENCSR773NQB A549 Homo sapiens
BP001127.1 NR3C1 ENCSR660RYY A549 Homo sapiens
BP001151.1 NR3C1 ENCSR919OXR A549 Homo sapiens
BP001200.1 NR3C1 ENCSR458VTP A549 Homo sapiens
Showing 8 profiles of page 2 from 2 pages