Detailed information of deep learning profile BP000581.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000581.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR691GRA
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.98e-03 -1.24e-03 5.32e-03 5.11e-02 8.68e-06 2.04e-02 -8.97e-04 1.78e-03 2.41e-03 -1.17e-03 1.75e-05 -5.64e-04 2.48e-03 7.39e-06 -1.81e-03 ]
C [ 6.98e-05 -3.18e-04 -9.63e-04 -1.13e-04 7.38e-02 -1.23e-03 2.59e-04 -9.64e-04 2.30e-03 1.26e-03 0.00e+00 -4.33e-04 -1.46e-03 5.98e-02 3.55e-03 ]
G [ 8.37e-03 4.19e-02 -9.07e-04 -4.52e-05 -7.25e-05 2.23e-03 2.14e-03 -1.05e-03 7.90e-04 -2.99e-04 8.32e-02 -4.02e-04 -1.39e-03 -1.88e-06 -4.71e-05 ]
T [ -1.83e-03 -4.84e-04 9.08e-04 -2.74e-04 9.58e-05 -2.14e-03 3.43e-03 2.80e-03 -1.04e-03 2.48e-02 9.84e-07 4.77e-02 3.52e-03 -6.37e-05 7.37e-03 ]

Frequency matrix

A [ 4281 1865 3867 8063 9 6757 1904 3022 2817 1576 4 755 2640 139 1874 ]
C [ 692 384 1756 549 10168 670 2615 2054 3031 476 0 294 2088 9920 3349 ]
G [ 3462 6305 2257 540 16 630 2884 1899 2559 254 10225 205 1302 11 162 ]
T [ 1795 1676 2350 1078 37 2174 2827 3254 1823 7924 1 8976 4200 160 4845 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000215.1 NR3C1 ENCSR952GOL A549 Homo sapiens
BP000278.1 NR3C1 ENCSR471EKW A549 Homo sapiens
BP000289.1 NR3C1 ENCSR000BHG A549 Homo sapiens
BP000310.1 NR3C1 ENCSR255CTA A549 Homo sapiens
BP000332.1 NR3C1 ENCSR720DXT A549 Homo sapiens
BP000345.1 NR3C1 ENCSR385RUW A549 Homo sapiens
BP000513.1 NR3C1 ENCSR070VXO A549 Homo sapiens
BP000659.1 NR3C1 ENCSR424JOE A549 Homo sapiens
BP000734.1 NR3C1 ENCSR686PFM A549 Homo sapiens
BP000782.1 NR3C1 ENCSR857QEA A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages