Detailed information of deep learning profile BP000581.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000581.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR691GRA
Model: BPNet

Contribution weight matrix (CWM)

A [ 7.37e-03 -6.37e-05 3.52e-03 4.77e-02 9.84e-07 2.48e-02 -1.04e-03 2.80e-03 3.43e-03 -2.14e-03 9.58e-05 -2.74e-04 9.08e-04 -4.84e-04 -1.83e-03 ]
C [ -4.71e-05 -1.88e-06 -1.39e-03 -4.02e-04 8.32e-02 -2.99e-04 7.90e-04 -1.05e-03 2.14e-03 2.23e-03 -7.25e-05 -4.52e-05 -9.07e-04 4.19e-02 8.37e-03 ]
G [ 3.55e-03 5.98e-02 -1.46e-03 -4.33e-04 0.00e+00 1.26e-03 2.30e-03 -9.64e-04 2.59e-04 -1.23e-03 7.38e-02 -1.13e-04 -9.63e-04 -3.18e-04 6.98e-05 ]
T [ -1.81e-03 7.39e-06 2.48e-03 -5.64e-04 1.75e-05 -1.17e-03 2.41e-03 1.78e-03 -8.97e-04 2.04e-02 8.68e-06 5.11e-02 5.32e-03 -1.24e-03 4.98e-03 ]

Frequency matrix

A [ 4845 160 4200 8976 1 7924 1823 3254 2827 2174 37 1078 2350 1676 1795 ]
C [ 162 11 1302 205 10225 254 2559 1899 2884 630 16 540 2257 6305 3462 ]
G [ 3349 9920 2088 294 0 476 3031 2054 2615 670 10168 549 1756 384 692 ]
T [ 1874 139 2640 755 4 1576 2817 3022 1904 6757 9 8063 3867 1865 4281 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000215.1 NR3C1 ENCSR952GOL A549 Homo sapiens
BP000278.1 NR3C1 ENCSR471EKW A549 Homo sapiens
BP000289.1 NR3C1 ENCSR000BHG A549 Homo sapiens
BP000310.1 NR3C1 ENCSR255CTA A549 Homo sapiens
BP000332.1 NR3C1 ENCSR720DXT A549 Homo sapiens
BP000345.1 NR3C1 ENCSR385RUW A549 Homo sapiens
BP000513.1 NR3C1 ENCSR070VXO A549 Homo sapiens
BP000659.1 NR3C1 ENCSR424JOE A549 Homo sapiens
BP000734.1 NR3C1 ENCSR686PFM A549 Homo sapiens
BP000782.1 NR3C1 ENCSR857QEA A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages