Detailed information of deep learning profile BP000582.1

This page shows detailed deep learning-derived predictions and motifs for GABPA in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: GABPA
Model ID: BP000582.1
Cell line/tissue: MCF-7
Class: Tryptophan cluster factors
Family: Ets-related
Best Match(es): MA0062.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q06546  
Source: ENCSR000BUK
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.71e-02 -1.26e-04 1.57e-04 9.65e-06 2.20e-05 9.03e-06 -1.37e-04 -3.81e-04 ]
C [ -3.84e-04 2.23e-02 8.74e-05 6.30e-05 8.16e-02 9.47e-02 -1.20e-05 5.37e-04 ]
G [ 3.47e-03 6.34e-04 1.03e-04 2.14e-04 4.87e-05 3.61e-05 5.63e-02 2.85e-02 ]
T [ -1.17e-03 1.41e-03 5.29e-02 7.28e-02 -9.32e-06 -7.03e-06 -1.30e-04 -2.18e-04 ]

Frequency matrix

A [ 20020 3690 4948 1637 549 23 1174 3543 ]
C [ 11614 30983 3419 3637 57408 58775 3875 14761 ]
G [ 18366 10882 3887 2323 315 87 36809 33205 ]
T [ 8910 13356 46656 51314 638 25 17053 7402 ]

13 profiles found for the same TF (GABPA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000852.1 GABPA ENCSR290MUH K562 Homo sapiens
BP001058.1 GABPA ENCSR000BHS HeLa-S3 Homo sapiens
BP001108.1 GABPA ENCSR000BPY A549 Homo sapiens
Showing 3 profiles of page 2 from 2 pages